ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Beef (ukb-b-10829)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Beef (👉 📊) Rheumatoid arthritis (bbj-a-151) Weighted median 5 -1.804106665 0.716115884 0.011759032
Beef (👉 📊) Rheumatoid arthritis (bbj-a-151) Inverse variance weighted 5 -1.481082367 0.559046094 0.008065804
Beef (👉 📊) Osteoarthritis (Firth correction) (ebi-a-GCST90013881) Weighted median 6 0.714165415 0.225529005 0.001542199
Beef (👉 📊) Osteoarthritis (Firth correction) (ebi-a-GCST90013881) Inverse variance weighted 6 0.469976597 0.214325877 0.028320845
Beef (👉 📊) Osteoarthritis (SPA correction) (ebi-a-GCST90013931) Weighted median 6 0.714166899 0.227135702 0.001665245
Beef (👉 📊) Osteoarthritis (SPA correction) (ebi-a-GCST90013931) Inverse variance weighted 6 0.469997668 0.214330211 0.028316956
Beef (👉 📊) Rheumatoid arthritis (ebi-a-GCST90018690) Weighted median 5 -1.453262057 0.620783538 0.01923152
Beef (👉 📊) Rheumatoid arthritis (ebi-a-GCST90018690) Inverse variance weighted 5 -1.332035946 0.509431324 0.008929259
Beef (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) MR Egger 7 2.034613183 0.700850594 0.033670416
Beef (👉 📊) Osteoarthritis (ebi-a-GCST90038686) Weighted median 7 0.033613379 0.01464692 0.021738227
Beef (👉 📊) Osteoarthritis (ebi-a-GCST90038686) Inverse variance weighted 7 0.02656402 0.013547572 0.049902874
Beef (👉 📊) Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) Inverse variance weighted 8 5.440189906 2.599897863 0.036397124
Beef (👉 📊) Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) Inverse variance weighted 8 5.40891261 2.597968935 0.037344534
Beef (👉 📊) Melanocytic naevi of scalp and neck (finn-b-CD2_BENIGN_MELANOCYTIC_SCALPNECK) Inverse variance weighted 8 4.0248761 1.702005577 0.018040574
Beef (👉 📊) Ohter specific/unspecified arthritis (finn-b-M13_ARTHRITISNAS) Inverse variance weighted 8 0.91051916 0.447189866 0.041741241
Beef (👉 📊) Calcific tendinitis of shoulder (finn-b-M13_CALCIFICTEND) Inverse variance weighted 8 2.519211898 1.000887138 0.011836589
Beef (👉 📊) Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) Inverse variance weighted 8 -4.611884071 2.005410276 0.021464033
Beef (👉 📊) Infective bursitis (finn-b-M13_INFBURSA) Inverse variance weighted 8 -3.247513761 1.467797023 0.026931532
Beef (👉 📊) Shoulder lesions (finn-b-M13_SHOULDER) Weighted median 8 0.67432407 0.316149289 0.032930529
Beef (👉 📊) Shoulder lesions (finn-b-M13_SHOULDER) Inverse variance weighted 8 0.474110553 0.240031606 0.048245397
Beef (👉 📊) Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) Weighted median 8 -5.501207028 2.734289224 0.044226988
Beef (👉 📊) Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) Inverse variance weighted 8 -5.118997121 2.131851803 0.016341516
Beef (👉 📊) Dislocation, sprain and strain of joints and ligaments at neck level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_NECK_LEVEL) Inverse variance weighted 8 -1.749840734 0.621470505 0.004867932
Beef (👉 📊) Injuries to the neck (finn-b-ST19_INJURI_NECK) Inverse variance weighted 8 -1.377030009 0.593309218 0.020290545
Beef (👉 📊) Other and unspecified injuries of neck (finn-b-ST19_OTHER_UNSPE_INJURI_NECK) Inverse variance weighted 8 -7.359172366 2.918403626 0.011680815
Beef (👉 📊) Forearm bone mineral density (ieu-a-977) Weighted median 8 0.736243748 0.36684034 0.04475106
Beef (👉 📊) Bone sialoprotein 2 (prot-a-1396) MR Egger 8 1.975267088 0.804304316 0.049395527
Beef (👉 📊) Osteocrin (prot-a-2157) Weighted median 8 1.018907865 0.513073232 0.047045352
Beef (👉 📊) Osteocrin (prot-a-2157) Inverse variance weighted 8 1.006226749 0.415641755 0.015482174
Beef (👉 📊) Bone morphogenetic protein receptor type-1A (prot-a-259) Weighted median 8 -1.166720443 0.594682629 0.049771662
Beef (👉 📊) Bone proteoglycan II (prot-c-2666_53_2) Weighted median 3 4.070876529 1.643985853 0.01327804
Beef (👉 📊) Bone proteoglycan II (prot-c-2666_53_2) Inverse variance weighted 3 3.141784628 1.322185389 0.017491703
Beef (👉 📊) Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) Inverse variance weighted 8 0.032578444 0.014158942 0.021396747
Beef (👉 📊) Fractured/broken bones in last 5 years (ukb-a-308) Inverse variance weighted 8 0.028793419 0.013428354 0.032014816
Beef (👉 📊) Diagnoses - main ICD10: M17 Gonarthrosis [arthrosis of knee] (ukb-a-563) Weighted median 8 0.015996428 0.007366404 0.029890524
Beef (👉 📊) Diagnoses - main ICD10: M17 Gonarthrosis [arthrosis of knee] (ukb-a-563) Inverse variance weighted 8 0.014619525 0.005802342 0.011749144
Beef (👉 📊) Operation code: knee replacement/revision (ukb-b-11120) Inverse variance weighted 5 0.012265647 0.005030677 0.014761816
Beef (👉 📊) Fractured/broken bones in last 5 years (ukb-b-13346) Inverse variance weighted 8 0.025941827 0.012323501 0.035285261
Beef (👉 📊) Heel bone ultrasound T-score, manual entry (ukb-b-17612) MR Egger 8 -0.607084757 0.229483811 0.038261303
Beef (👉 📊) Heel bone ultrasound T-score, manual entry (ukb-b-17612) Inverse variance weighted 8 -0.266560125 0.126759259 0.035475837
Beef (👉 📊) Operative procedures - secondary OPCS: Z81.2 Acromioclavicular joint (ukb-b-17708) Weighted median 5 0.008350902 0.003700115 0.024012442
Beef (👉 📊) Operative procedures - secondary OPCS: Z81.2 Acromioclavicular joint (ukb-b-17708) Inverse variance weighted 5 0.008452416 0.00293428 0.00396949
Beef (👉 📊) Diagnoses - main ICD10: M54.56 Low back pain (Lumbar region) (ukb-b-19813) Inverse variance weighted 5 -0.006288643 0.002592178 0.01526598
Beef (👉 📊) Operative procedures - main OPCS: T72.3 Release of constriction of sheath of tendon (ukb-b-5534) Weighted median 5 0.009053869 0.004176469 0.03017172
Beef (👉 📊) Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) Inverse variance weighted 5 0.007947105 0.003930334 0.04317714
Beef (👉 📊) Diagnoses - main ICD10: M13 Other arthritis (ukb-d-M13) Inverse variance weighted 7 -0.006239177 0.002508853 0.01288746
Beef (👉 📊) Ohter specific/unspecified arthritis (ukb-d-M13_ARTHRITISNAS) Inverse variance weighted 6 -0.00515626 0.002590859 0.046571749
Beef (👉 📊) Other joint disorders (ukb-d-M13_OTHERJOINT) Inverse variance weighted 8 0.023142705 0.010713179 0.030756503
Beef (👉 📊) Other arthritis (FG) (ukb-d-RHEU_ARTHRITIS_OTH) Inverse variance weighted 7 -0.006239177 0.002508853 0.01288746
Beef (👉 📊) Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) Weighted median 8 0.010181777 0.003838535 0.007989415
Beef (👉 📊) Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) Inverse variance weighted 8 0.006197282 0.002931398 0.034506323
Beef (👉 📊) Other disorders of synovium, tendon, and bursa (ukb-e-727_CSA) Inverse variance weighted 6 -4.554154393 1.846541279 0.013651083

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Beef Rheumatoid arthritis (bbj-a-151) All - Inverse variance weighted -1.48108236716384 0.55904609406732 0.0080658035186782
Beef Osteoarthritis (Firth correction) (ebi-a-GCST90013881) rs6739502 0.944796023817726 0.398729885340288 0.0178114833721095
Beef Osteoarthritis (Firth correction) (ebi-a-GCST90013881) All - Inverse variance weighted 0.469976596540055 0.214325876503826 0.0283208454034138
Beef Osteoarthritis (SPA correction) (ebi-a-GCST90013931) rs6739502 0.944855076029723 0.39870183553959 0.0177963255456501
Beef Osteoarthritis (SPA correction) (ebi-a-GCST90013931) All - Inverse variance weighted 0.469997667582647 0.214330210720103 0.0283169557457614
Beef Rheumatoid arthritis (ebi-a-GCST90018690) rs7699859 -1.99292012335491 0.996568648742562 0.0455238006526386
Beef Rheumatoid arthritis (ebi-a-GCST90018690) All - Inverse variance weighted -1.33203594607952 0.509431323554783 0.0089292585072521
Beef Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) rs143363049 1.88622726464283 0.75261871998652 0.0122030043620267
Beef Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) All - MR Egger 2.03461318315457 0.70085059375242 0.0336704161924095
Beef Osteoarthritis (ebi-a-GCST90038686) rs2602248 0.0754261201143947 0.0276712106768351 0.006414631684179
Beef Osteoarthritis (ebi-a-GCST90038686) All - Inverse variance weighted 0.0265640195944607 0.0135475721675953 0.0499028741473517
Beef Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) All - Inverse variance weighted 5.44018990623741 2.59989786276733 0.0363971242717374
Beef Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) All - Inverse variance weighted 5.40891261030805 2.59796893497608 0.037344534019167
Beef Melanocytic naevi of scalp and neck (finn-b-CD2_BENIGN_MELANOCYTIC_SCALPNECK) All - Inverse variance weighted 4.02487609950865 1.7020055772173 0.0180405738434433
Beef Ohter specific/unspecified arthritis (finn-b-M13_ARTHRITISNAS) All - Inverse variance weighted 0.910519159987524 0.44718986605513 0.0417412411172094
Beef Calcific tendinitis of shoulder (finn-b-M13_CALCIFICTEND) rs143363049 12.0503243562021 5.10170649742106 0.0181757425810115
Beef Calcific tendinitis of shoulder (finn-b-M13_CALCIFICTEND) All - Inverse variance weighted 2.51921189796872 1.00088713837916 0.0118365887493096
Beef Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) rs7697997 -13.5267377230152 4.91224010682556 0.0058929341058557
Beef Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) All - Inverse variance weighted -4.61188407057199 2.00541027561687 0.0214640331259205
Beef Infective bursitis (finn-b-M13_INFBURSA) rs6739502 -8.96117317061168 3.50868559618129 0.0106494114462265
Beef Infective bursitis (finn-b-M13_INFBURSA) All - Inverse variance weighted -3.24751376096302 1.46779702288975 0.0269315320743804
Beef Shoulder lesions (finn-b-M13_SHOULDER) All - Inverse variance weighted 0.47411055332552 0.240031605971764 0.0482453967545732
Beef Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) All - Inverse variance weighted -5.11899712086382 2.1318518028074 0.0163415160230559
Beef Dislocation, sprain and strain of joints and ligaments at neck level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_NECK_LEVEL) rs2602248 -3.15538608198284 1.56339370829361 0.0435607883214252
Beef Dislocation, sprain and strain of joints and ligaments at neck level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_NECK_LEVEL) rs7697997 -3.89990406910881 1.52814535217242 0.0107091003573958
Beef Dislocation, sprain and strain of joints and ligaments at neck level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_NECK_LEVEL) All - Inverse variance weighted -1.74984073424327 0.621470504772142 0.0048679323059028
Beef Injuries to the neck (finn-b-ST19_INJURI_NECK) rs117540843 -4.03648590278895 1.65660227147612 0.0148258514715735
Beef Injuries to the neck (finn-b-ST19_INJURI_NECK) rs2602248 -3.13155386081983 1.25357483317445 0.0124861367757913
Beef Injuries to the neck (finn-b-ST19_INJURI_NECK) All - Inverse variance weighted -1.37703000907414 0.593309218252148 0.0202905452217357
Beef Other and unspecified injuries of neck (finn-b-ST19_OTHER_UNSPE_INJURI_NECK) rs7697997 -15.3393012953081 7.11045550301049 0.0309832208645857
Beef Other and unspecified injuries of neck (finn-b-ST19_OTHER_UNSPE_INJURI_NECK) All - Inverse variance weighted -7.35917236617709 2.91840362612323 0.0116808154349299
Beef Forearm bone mineral density (ieu-a-977) rs6739502 -2.37153683381723 0.835736430293785 0.004544539378306
Beef Bone sialoprotein 2 (prot-a-1396) rs117540843 2.4925258103038 1.06374869783947 0.0191215467836472
Beef Bone sialoprotein 2 (prot-a-1396) All - MR Egger 1.97526708758941 0.804304315713407 0.0493955269237578
Beef Osteocrin (prot-a-2157) All - Inverse variance weighted 1.00622674862958 0.415641755307451 0.0154821742292812
Beef Bone morphogenetic protein receptor type-1A (prot-a-259) rs117540843 2.51962768795576 1.06374869783947 0.017854076965251
Beef Bone morphogenetic protein receptor type-1A (prot-a-259) rs328328 -3.01842551925668 1.18112302927435 0.0106018435684866
Beef Bone proteoglycan II (prot-c-2666_53_2) rs2602248 4.52621544327931 2.19399904671115 0.0391128269502144
Beef Bone proteoglycan II (prot-c-2666_53_2) rs7699859 4.43710878493487 2.24777637821116 0.0483818332748312
Beef Bone proteoglycan II (prot-c-2666_53_2) All - Inverse variance weighted 3.14178462768609 1.32218538888479 0.0174917025382293
Beef Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) rs2602248 0.0759737845567207 0.0340825071496663 0.0258063387654582
Beef Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) rs6739502 0.0759076817085773 0.033192313370405 0.0222013435690021
Beef Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) rs7699859 0.0663611750568272 0.0333563537911364 0.0466503090607225
Beef Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) All - Inverse variance weighted 0.0325784436455087 0.0141589417712881 0.0213967469685656
Beef Fractured/broken bones in last 5 years (ukb-a-308) rs143363049 0.0701655012309622 0.0327887144635719 0.0323605536704773
Beef Fractured/broken bones in last 5 years (ukb-a-308) All - Inverse variance weighted 0.0287934193299135 0.0134283535564946 0.0320148155969738
Beef Diagnoses - main ICD10: M17 Gonarthrosis [arthrosis of knee] (ukb-a-563) rs7699859 0.0356640460988287 0.0166603927473493 0.0323023879371318
Beef Diagnoses - main ICD10: M17 Gonarthrosis [arthrosis of knee] (ukb-a-563) All - Inverse variance weighted 0.0146195251989843 0.0058023418057321 0.0117491438217372
Beef Operation code: knee replacement/revision (ukb-b-11120) All - Inverse variance weighted 0.012265647491183 0.0050306770118666 0.0147618160357448
Beef Fractured/broken bones in last 5 years (ukb-b-13346) rs143363049 0.0666530933191047 0.0284253044642272 0.0190347031451031
Beef Fractured/broken bones in last 5 years (ukb-b-13346) All - Inverse variance weighted 0.0259418265627224 0.0123235014095179 0.035285261456438
Beef Heel bone ultrasound T-score, manual entry (ukb-b-17612) rs143363049 -0.98681045054153 0.314504760032576 0.001702996279278
Beef Heel bone ultrasound T-score, manual entry (ukb-b-17612) All - Inverse variance weighted -0.266560124879884 0.126759259209772 0.0354758370990734
Beef Heel bone ultrasound T-score, manual entry (ukb-b-17612) All - MR Egger -0.60708475698742 0.229483810678219 0.038261303382416
Beef Operative procedures - secondary OPCS: Z81.2 Acromioclavicular joint (ukb-b-17708) rs7697997 0.0139880737173461 0.0066870580068549 0.0364552624244147
Beef Operative procedures - secondary OPCS: Z81.2 Acromioclavicular joint (ukb-b-17708) All - Inverse variance weighted 0.0084524162462252 0.0029342797156508 0.0039694901524789
Beef Diagnoses - main ICD10: M54.56 Low back pain (Lumbar region) (ukb-b-19813) rs7697997 -0.0141202076735072 0.0057765822571237 0.0145098171903571
Beef Diagnoses - main ICD10: M54.56 Low back pain (Lumbar region) (ukb-b-19813) All - Inverse variance weighted -0.0062886427735331 0.0025921784344776 0.0152659799417738
Beef Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) rs6739502 0.0204642980168299 0.0066346636484425 0.0020392787977462
Beef Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) All - Inverse variance weighted 0.0079471045658471 0.0039303336053773 0.043177140001193
Beef Diagnoses - main ICD10: M13 Other arthritis (ukb-d-M13) All - Inverse variance weighted -0.0062391774509656 0.0025088533490234 0.0128874600840222
Beef Ohter specific/unspecified arthritis (ukb-d-M13_ARTHRITISNAS) All - Inverse variance weighted -0.0051562601031198 0.0025908586746636 0.0465717487858829
Beef Other joint disorders (ukb-d-M13_OTHERJOINT) All - Inverse variance weighted 0.023142704701009 0.0107131791624718 0.0307565034636835
Beef Other arthritis (FG) (ukb-d-RHEU_ARTHRITIS_OTH) All - Inverse variance weighted -0.0062391774509656 0.0025088533490234 0.0128874600840222
Beef Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) All - Inverse variance weighted 0.0061972820068591 0.002931397824694 0.0345063232910162
Beef Other disorders of synovium, tendon, and bursa (ukb-e-727_CSA) rs6739502 -9.98474484523399 4.80832636189164 0.0378428286093255
Beef Other disorders of synovium, tendon, and bursa (ukb-e-727_CSA) All - Inverse variance weighted -4.55415439308396 1.84654127929452 0.0136510825203634