ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Crisp (ukb-b-12602)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Crisp (👉 📊) Rheumatoid arthritis (bbj-a-151) Weighted median 5 1.155882368 0.571898256 0.043266012
Crisp (👉 📊) Rheumatoid arthritis (bbj-a-151) Inverse variance weighted 5 1.095004124 0.45414954 0.015904087
Crisp (👉 📊) Rheumatoid arthritis (ebi-a-GCST000679) Weighted median 3 -2.579825948 0.843730053 0.002230846
Crisp (👉 📊) Rheumatoid arthritis (ebi-a-GCST000679) Inverse variance weighted 3 -2.090556932 0.728003892 0.004083624
Crisp (👉 📊) Osteoprotegerin levels (ebi-a-GCST90000490) Weighted median 8 -2.780340005 1.198134167 0.020310703
Crisp (👉 📊) Rheumatoid arthritis (ebi-a-GCST90018690) Inverse variance weighted 5 1.001607196 0.381572973 0.008666355
Crisp (👉 📊) Rheumatoid arthritis (ebi-a-GCST90018910) Weighted median 9 0.649416223 0.296242872 0.028366872
Crisp (👉 📊) Rheumatoid arthritis (ebi-a-GCST90018910) Inverse variance weighted 9 0.514159457 0.225358139 0.022517601
Crisp (👉 📊) Joint disorder (ebi-a-GCST90038654) Weighted median 9 0.031038318 0.015074465 0.039494267
Crisp (👉 📊) Benign neoplasm: Scapula and long bones of upper limb (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER) Inverse variance weighted 9 4.792841535 2.062519023 0.02013726
Crisp (👉 📊) Benign neoplasm: Scapula and long bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER_EXALLC) Inverse variance weighted 9 4.76742198 2.064753675 0.020946115
Crisp (👉 📊) Ankylosing spondylitis, strict definition (finn-b-M13_ANKYLOSPON_STRICT) MR Egger 9 -8.803139834 2.740639397 0.014815355
Crisp (👉 📊) Other bursitis of hip (finn-b-M13_BURSITISHIPOTH) Inverse variance weighted 9 3.995756722 1.472327348 0.006649521
Crisp (👉 📊) Pyogenic arthritis (finn-b-M13_PYOGARTH) Inverse variance weighted 9 -1.486387352 0.704907865 0.03497684
Crisp (👉 📊) Postmenopausal osteoporosis with pathological fracture (finn-b-OSTPOPATFRCTURE_POSTEMENO) Weighted median 9 2.742881967 1.375839087 0.046195057
Crisp (👉 📊) Pain (limb, back, neck, head abdominally) (finn-b-PAIN) Inverse variance weighted 9 0.222482986 0.112201845 0.047380644
Crisp (👉 📊) Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) MR Egger 9 -1.857480977 0.645724808 0.023767332
Crisp (👉 📊) Superficial injury of shoulder and upper arm (finn-b-ST19_SUPERF_INJURY_SHOUL_UPPER_ARM) MR Egger 9 -4.730480926 1.838985885 0.036882305
Crisp (👉 📊) Ankle and foot (finn-b-Z21_ANKLE_FOOT) Inverse variance weighted 9 -4.905741477 2.082944723 0.018512976
Crisp (👉 📊) Rheumatoid arthritis (ieu-a-834) Weighted median 3 -2.576465417 0.872968878 0.003163545
Crisp (👉 📊) Rheumatoid arthritis (ieu-a-834) Inverse variance weighted 3 -2.086947887 0.726829375 0.004087826
Crisp (👉 📊) Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) MR Egger 9 0.019736516 0.008081436 0.044614477
Crisp (👉 📊) Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) Weighted median 9 -0.22318011 0.099643154 0.025104319
Crisp (👉 📊) Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) Weighted median 9 0.002775712 0.001076386 0.009916367
Crisp (👉 📊) Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) Inverse variance weighted 9 0.0027363 0.000905249 0.002505264
Crisp (👉 📊) Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) Weighted median 6 -0.012850465 0.004622187 0.005433049
Crisp (👉 📊) Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) Inverse variance weighted 6 -0.011757315 0.00349055 0.000756257
Crisp (👉 📊) Non-cancer illness code, self-reported: osteoarthritis (ukb-b-14486) Weighted median 9 0.025648021 0.013005421 0.048597917
Crisp (👉 📊) Operative procedures - secondary OPCS: Z48.2 Skin of neck (ukb-b-14873) Weighted median 6 0.008787746 0.004380424 0.044841274
Crisp (👉 📊) Operative procedures - secondary OPCS: Z48.2 Skin of neck (ukb-b-14873) Inverse variance weighted 6 0.00740925 0.003346462 0.026825025
Crisp (👉 📊) Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) Weighted median 5 -0.009915512 0.004522125 0.028331424
Crisp (👉 📊) Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) Inverse variance weighted 5 -0.009748251 0.003745922 0.009258365
Crisp (👉 📊) Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) Weighted median 3 -0.008203293 0.003785754 0.030243654
Crisp (👉 📊) Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) Weighted median 5 -0.010268104 0.004639798 0.02689423
Crisp (👉 📊) Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) Inverse variance weighted 5 -0.008995386 0.003358195 0.007392242
Crisp (👉 📊) Diagnoses - secondary ICD10: Z96.6 Presence of orthopaedic joint implants (ukb-b-20477) Inverse variance weighted 6 -0.008896325 0.004384088 0.042434839
Crisp (👉 📊) Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) Weighted median 4 -0.008560838 0.004348943 0.049012011
Crisp (👉 📊) Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) Inverse variance weighted 4 -0.009593298 0.004061977 0.018189813
Crisp (👉 📊) Adhesive capsulitis of shoulder (ukb-d-M13_ADHCAPSULITIS) MR Egger 9 0.013686166 0.005645635 0.045808654
Crisp (👉 📊) Shoulder lesions (ukb-d-M13_SHOULDER) MR Egger 9 0.030404332 0.012520353 0.045527822
Crisp (👉 📊) Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) MR Egger 9 0.030336969 0.012521209 0.04589995
Crisp (👉 📊) Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) Weighted median 9 -0.006869485 0.003484229 0.048656009
Crisp (👉 📊) Neck/shoulder pain for 3+ months (ukb-e-3404_AFR) Inverse variance weighted 7 1.932166995 0.936674323 0.039132121

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Crisp Rheumatoid arthritis (bbj-a-151) rs72610845 1.33787518579409 0.590397451516119 0.0234477993896987
Crisp Rheumatoid arthritis (bbj-a-151) All - Inverse variance weighted 1.095004123844 0.454149539810978 0.0159040867611004
Crisp Rheumatoid arthritis (ebi-a-GCST000679) rs12959170 -2.83261318438545 0.945428713060653 0.0027344325534528
Crisp Rheumatoid arthritis (ebi-a-GCST000679) All - Inverse variance weighted -2.09055693225657 0.728003892133952 0.0040836235089806
Crisp Osteoprotegerin levels (ebi-a-GCST90000490) rs10153975 -5.2169807724451 2.03917060826166 0.0105159999629148
Crisp Osteoprotegerin levels (ebi-a-GCST90000490) rs7377083 -4.6800071761403 2.33079097551869 0.0446533730631112
Crisp Rheumatoid arthritis (ebi-a-GCST90018690) rs543197 2.18276753777476 0.990481987976255 0.0275424381565444
Crisp Rheumatoid arthritis (ebi-a-GCST90018690) rs72610845 1.08959382223957 0.526309495178881 0.0384286564632637
Crisp Rheumatoid arthritis (ebi-a-GCST90018690) All - Inverse variance weighted 1.0016071960212 0.381572972570167 0.0086663545495871
Crisp Rheumatoid arthritis (ebi-a-GCST90018910) All - Inverse variance weighted 0.514159457241503 0.225358139037041 0.0225176012737797
Crisp Joint disorder (ebi-a-GCST90038654) rs114906375 0.0636860474250637 0.0278992021007979 0.0224469074769822
Crisp Joint disorder (ebi-a-GCST90038654) rs12959170 0.0687677841660909 0.0274164022217278 0.0121323359778593
Crisp Joint disorder (ebi-a-GCST90038654) rs7377083 -0.175780041602219 0.0326426136666683 7.24499911682805e-08
Crisp Benign neoplasm: Scapula and long bones of upper limb (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER) rs12959170 10.5699910615659 5.01957478034481 0.035225702418199
Crisp Benign neoplasm: Scapula and long bones of upper limb (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER) All - Inverse variance weighted 4.79284153471572 2.06251902340308 0.0201372601529503
Crisp Benign neoplasm: Scapula and long bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER_EXALLC) rs12959170 10.5114423666163 5.02347802667479 0.0363971099799572
Crisp Benign neoplasm: Scapula and long bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SCAPULA_LONG_UPPER_EXALLC) All - Inverse variance weighted 4.76742197995966 2.06475367472264 0.0209461145191452
Crisp Ankylosing spondylitis, strict definition (finn-b-M13_ANKYLOSPON_STRICT) rs150252324 -6.53250709829848 3.15572043411881 0.0384474246558177
Crisp Ankylosing spondylitis, strict definition (finn-b-M13_ANKYLOSPON_STRICT) rs543197 6.62532914295422 2.85021282218258 0.020098534302167
Crisp Ankylosing spondylitis, strict definition (finn-b-M13_ANKYLOSPON_STRICT) rs72610845 -8.74727140591098 3.97937767684772 0.027938376066343
Crisp Ankylosing spondylitis, strict definition (finn-b-M13_ANKYLOSPON_STRICT) All - MR Egger -8.80313983395291 2.74063939675118 0.0148153552463262
Crisp Other bursitis of hip (finn-b-M13_BURSITISHIPOTH) rs543197 9.80586464320432 4.53013958492596 0.0304196084949432
Crisp Other bursitis of hip (finn-b-M13_BURSITISHIPOTH) All - Inverse variance weighted 3.99575672165346 1.47232734779189 0.0066495208821578
Crisp Pyogenic arthritis (finn-b-M13_PYOGARTH) rs12959170 -4.21940928270042 1.70962189252802 0.0135856454717123
Crisp Pyogenic arthritis (finn-b-M13_PYOGARTH) All - Inverse variance weighted -1.48638735234767 0.704907865059242 0.0349768400007823
Crisp Postmenopausal osteoporosis with pathological fracture (finn-b-OSTPOPATFRCTURE_POSTEMENO) rs543197 -5.99771605462593 2.90212067159319 0.0387655741776372
Crisp Postmenopausal osteoporosis with pathological fracture (finn-b-OSTPOPATFRCTURE_POSTEMENO) rs57871178 5.61078517594933 2.81281426148782 0.0460731043361826
Crisp Pain (limb, back, neck, head abdominally) (finn-b-PAIN) All - Inverse variance weighted 0.222482986060338 0.112201845068932 0.0473806444714921
Crisp Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) rs114906375 -2.17710893400218 0.857376920400857 0.011108500577018
Crisp Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) All - MR Egger -1.8574809770667 0.645724807976638 0.0237673322562041
Crisp Superficial injury of shoulder and upper arm (finn-b-ST19_SUPERF_INJURY_SHOUL_UPPER_ARM) All - MR Egger -4.73048092632562 1.83898588547984 0.0368823051793197
Crisp Ankle and foot (finn-b-Z21_ANKLE_FOOT) rs10153975 -11.0843613736397 5.00262447180672 0.0267114202115543
Crisp Ankle and foot (finn-b-Z21_ANKLE_FOOT) All - Inverse variance weighted -4.90574147740948 2.08294472252802 0.0185129763095511
Crisp Rheumatoid arthritis (ieu-a-834) rs12959170 -2.83261318438545 0.959195462866466 0.0031458615260371
Crisp Rheumatoid arthritis (ieu-a-834) All - Inverse variance weighted -2.08694788698436 0.726829374837109 0.0040878255821857
Crisp Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) rs114906375 0.0217505526938918 0.0095169848163485 0.0222867028175993
Crisp Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) All - MR Egger 0.0197365161041148 0.0080814362460681 0.0446144771312722
Crisp Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs72721656 0.460951974946302 0.198653445703324 0.0203201958160407
Crisp Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs7377083 -0.639054688977352 0.203814506470648 0.0017157777566439
Crisp Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs150252324 0.0055461786629638 0.0025049843526559 0.0268248437868431
Crisp Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs57871178 0.0072366883008449 0.0025491222015652 0.0045270160403076
Crisp Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) All - Inverse variance weighted 0.0027362995833816 0.0009052486675267 0.0025052641543648
Crisp Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) rs12959170 -0.0179105532071023 0.007567106562528 0.0179379793789744
Crisp Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) All - Inverse variance weighted -0.0117573145354537 0.0034905497133748 0.0007562570887718
Crisp Non-cancer illness code, self-reported: osteoarthritis (ukb-b-14486) rs150252324 0.056493060592872 0.0278529633237308 0.0425336854057756
Crisp Non-cancer illness code, self-reported: osteoarthritis (ukb-b-14486) rs57871178 -0.0658595596721105 0.0280306960416504 0.0187960514079112
Crisp Non-cancer illness code, self-reported: osteoarthritis (ukb-b-14486) rs7377083 -0.166102434554085 0.0282440760476922 4.07880382419526e-09
Crisp Operative procedures - secondary OPCS: Z48.2 Skin of neck (ukb-b-14873) All - Inverse variance weighted 0.0074092495567394 0.0033464620354493 0.0268250253892969
Crisp Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) rs7377083 -0.0198086685835366 0.0079331746177978 0.0125269814161198
Crisp Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) All - Inverse variance weighted -0.0097482514348886 0.0037459222352717 0.0092583653060832
Crisp Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) rs12959170 -0.0086746527086577 0.0042830712303422 0.0428330095444209
Crisp Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) rs7377083 0.0116875566696891 0.0050931686053559 0.021747365358558
Crisp Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) rs72721656 -0.0164431290888521 0.0077033973339454 0.0327994590591948
Crisp Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) All - Inverse variance weighted -0.0089953861679976 0.0033581949537117 0.0073922424834735
Crisp Diagnoses - secondary ICD10: Z96.6 Presence of orthopaedic joint implants (ukb-b-20477) rs7377083 -0.0226413045059373 0.0113016936660864 0.0451391980011518
Crisp Diagnoses - secondary ICD10: Z96.6 Presence of orthopaedic joint implants (ukb-b-20477) All - Inverse variance weighted -0.0088963248335012 0.0043840883186496 0.0424348392246224
Crisp Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) rs72721656 -0.0139821525193068 0.006518962435849 0.0319653826000551
Crisp Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) rs7377083 -0.0191007035526743 0.0066476757548281 0.0040622040657375
Crisp Operative procedures - main OPCS: W84.8 Other specified therapeutic endoscopic operations on other joint structure (ukb-b-8566) All - Inverse variance weighted -0.0095932976853078 0.0040619765002827 0.0181898130845312
Crisp Adhesive capsulitis of shoulder (ukb-d-M13_ADHCAPSULITIS) rs72610845 0.0163234650549399 0.0064027109181875 0.0107889419288528
Crisp Adhesive capsulitis of shoulder (ukb-d-M13_ADHCAPSULITIS) All - MR Egger 0.0136861660163817 0.0056456352652728 0.0458086538726668
Crisp Shoulder lesions (ukb-d-M13_SHOULDER) All - MR Egger 0.0304043317304397 0.012520352789705 0.0455278223798446
Crisp Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) All - MR Egger 0.0303369693004977 0.0125212087690815 0.0458999497808404
Crisp Neck/shoulder pain for 3+ months (ukb-e-3404_AFR) All - Inverse variance weighted 1.93216699495374 0.936674322927346 0.039132120965659