ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Homemade soup (ukb-b-12658)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Homemade soup (👉 📊) Rheumatoid Arthritis (bbj-a-72) Inverse variance weighted 9 1.260935364 0.545267107 0.020749623
Homemade soup (👉 📊) Rheumatoid Arthritis (bbj-a-72) Simple mode 9 2.770151932 1.182037193 0.047154356
Homemade soup (👉 📊) Osteoarthritis (hip) (ebi-a-GCST007091) Inverse variance weighted 18 0.419010618 0.19476702 0.031449156
Homemade soup (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) Weighted median 15 0.780189316 0.333104553 0.019171699
Homemade soup (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) Inverse variance weighted 15 0.478208886 0.238259353 0.044739669
Homemade soup (👉 📊) Bone disorder (ebi-a-GCST90038652) Inverse variance weighted 16 0.011608185 0.00522666 0.0263539
Homemade soup (👉 📊) Osteoporosis (ebi-a-GCST90038656) Inverse variance weighted 16 0.011567437 0.004457745 0.009461636
Homemade soup (👉 📊) Fractures (ebi-a-GCST90038703) MR Egger 16 -0.026437019 0.010694063 0.026874278
Homemade soup (👉 📊) Fracture of lower leg or ankle (ebi-a-GCST90038707) Weighted median 16 -0.007770818 0.003604757 0.031106169
Homemade soup (👉 📊) Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) Weighted median 16 1.90477415 0.939393541 0.042594587
Homemade soup (👉 📊) Lower back pain or/and sciatica (finn-b-M13_LOWBACKPAINORANDSCIATICA) MR Egger 16 1.041744118 0.466396616 0.042341922
Homemade soup (👉 📊) Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) Inverse variance weighted 16 1.356635293 0.642960531 0.034859887
Homemade soup (👉 📊) Osteonecrosis due to drugs (finn-b-OSTEON_DRUGS) Weighted median 16 -7.052680218 3.519147589 0.045060672
Homemade soup (👉 📊) Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) MR Egger 16 7.930003935 2.810532821 0.013591691
Homemade soup (👉 📊) Injuries to the abdomen, lower back, lumbar spine and pelvis (finn-b-ST19_INJURI_ABDOMEN_LOWER_BACK_LUMBAR_SPINE_PELVIS) MR Egger 16 2.152988278 0.643203691 0.004789737
Homemade soup (👉 📊) Injuries to the wrist and hand (finn-b-ST19_INJURI_WRIST_HAND) Weighted median 16 0.562770131 0.273044419 0.039294102
Homemade soup (👉 📊) Injury of muscle and tendon at hip and thigh level (finn-b-ST19_INJURY_MUSCLE_TENDON_HIP_THIGH_LEVEL) Weighted median 16 -2.070544745 1.050359192 0.048692655
Homemade soup (👉 📊) Injury of muscle and tendon at hip and thigh level (finn-b-ST19_INJURY_MUSCLE_TENDON_HIP_THIGH_LEVEL) Inverse variance weighted 16 -1.926736365 0.74853675 0.01005292
Homemade soup (👉 📊) Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) Weighted median 16 4.758248155 2.088680031 0.022719874
Homemade soup (👉 📊) Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) Inverse variance weighted 16 4.917828652 1.424202856 0.000554308
Homemade soup (👉 📊) Rheumatoid arthritis (ieu-a-831) Inverse variance weighted 7 1.480938376 0.589620205 0.012015736
Homemade soup (👉 📊) Rheumatoid arthritis (ieu-a-831) Simple mode 7 2.925676175 1.177886437 0.047557586
Homemade soup (👉 📊) Psoriatic arthritis (ieu-b-5116) Weighted median 16 1.316260986 0.625623801 0.035385627
Homemade soup (👉 📊) Bone morphogenetic protein 7 (prot-a-257) Inverse variance weighted 16 0.950115581 0.427914663 0.02639577
Homemade soup (👉 📊) Fractured bone site(s): Wrist (ukb-a-439) Inverse variance weighted 18 -0.012271919 0.005719302 0.031896739
Homemade soup (👉 📊) Fractured bone site(s): Other bones (ukb-a-441) MR Egger 18 -0.041625098 0.01946879 0.048289986
Homemade soup (👉 📊) Operative procedures - secondary OPCS: Z84.6 Knee joint (ukb-b-10001) Inverse variance weighted 10 0.012953 0.006366041 0.041880805
Homemade soup (👉 📊) Operative procedures - secondary OPCS: W28.1 Application of internal fixation to bone NEC (ukb-b-10298) Weighted median 3 0.012984931 0.005910873 0.028035635
Homemade soup (👉 📊) Operative procedures - secondary OPCS: W28.1 Application of internal fixation to bone NEC (ukb-b-10298) Inverse variance weighted 3 0.011065421 0.004655404 0.017458913
Homemade soup (👉 📊) Operation code: knee replacement/revision (ukb-b-11120) Inverse variance weighted 8 -0.013674827 0.005810143 0.018591958
Homemade soup (👉 📊) Non-cancer illness code, self-reported: osteoporosis (ukb-b-12141) Inverse variance weighted 10 0.017831853 0.005970983 0.00282266
Homemade soup (👉 📊) Operation code: bone surgery/joint surgery (ukb-b-12974) Inverse variance weighted 7 -0.014875647 0.005110288 0.003603643
Homemade soup (👉 📊) Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) Weighted median 7 0.014152831 0.00686975 0.039382583
Homemade soup (👉 📊) Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) Inverse variance weighted 7 0.018133887 0.004961935 0.000257584
Homemade soup (👉 📊) Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) Inverse variance weighted 6 -0.010155705 0.004705283 0.030899668
Homemade soup (👉 📊) Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) Weighted median 3 -0.011631043 0.005159347 0.024173306
Homemade soup (👉 📊) Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) Inverse variance weighted 3 -0.011270151 0.004235753 0.007797386
Homemade soup (👉 📊) Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) Weighted median 6 0.012300018 0.006073742 0.042855711
Homemade soup (👉 📊) Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) Inverse variance weighted 6 0.015489134 0.004680593 0.000935546
Homemade soup (👉 📊) Diagnoses - main ICD10: M25.56 Pain in joint (Lower leg) (ukb-b-2083) Inverse variance weighted 4 -0.008700398 0.004336307 0.044812803
Homemade soup (👉 📊) Non-cancer illness code, self-reported: spine arthritis/spondylitis (ukb-b-5389) MR Egger 7 0.100950276 0.037300622 0.042458425
Homemade soup (👉 📊) Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) Inverse variance weighted 6 0.009185567 0.004155255 0.027064225
Homemade soup (👉 📊) Knee pain for 3+ months (ukb-b-8906) Inverse variance weighted 18 -0.062045689 0.031036034 0.04559212
Homemade soup (👉 📊) Cervicalgia (ukb-d-M13_CERVICALGIA) MR Egger 16 -0.015693749 0.005401411 0.011516401
Homemade soup (👉 📊) Fractured bone site(s) (ukb-e-6151_p7_CSA) Weighted mode 16 -4.801460297 2.25113929 0.049862864
Homemade soup (👉 📊) Internal derangement of knee (ukb-e-835_CSA) Inverse variance weighted 16 2.524127782 1.137464333 0.026481077

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Homemade soup Rheumatoid Arthritis (bbj-a-72) All - Inverse variance weighted 1.26093536383618 0.545267107040615 0.0207496225267674
Homemade soup Osteoarthritis (hip) (ebi-a-GCST007091) All - Inverse variance weighted 0.419010617643578 0.194767020482248 0.0314491562648265
Homemade soup Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) All - Inverse variance weighted 0.478208885990512 0.238259352917083 0.0447396691454408
Homemade soup Bone disorder (ebi-a-GCST90038652) rs10110298 0.0496773458215865 0.0218069974891638 0.0227238304472308
Homemade soup Bone disorder (ebi-a-GCST90038652) All - Inverse variance weighted 0.0116081847540679 0.0052266598590428 0.0263539004852013
Homemade soup Osteoporosis (ebi-a-GCST90038656) rs10110298 0.0420657242371114 0.0185990942217246 0.0237154366996067
Homemade soup Osteoporosis (ebi-a-GCST90038656) All - Inverse variance weighted 0.0115674365332721 0.0044577451396553 0.0094616364376131
Homemade soup Fractures (ebi-a-GCST90038703) rs10110298 -0.0441186428746225 0.0196716805170512 0.0249130014074169
Homemade soup Fractures (ebi-a-GCST90038703) All - MR Egger -0.0264370191227084 0.0106940634422953 0.0268742781093875
Homemade soup Fracture of lower leg or ankle (ebi-a-GCST90038707) rs57169211 0.0240230801109375 0.0108194250838262 0.0263939549127047
Homemade soup Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) rs182666209 3.63085100409874 1.79340699990202 0.0429130849715379
Homemade soup Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) rs57169211 -8.79849532978418 3.93555884645814 0.0253753197208804
Homemade soup Lower back pain or/and sciatica (finn-b-M13_LOWBACKPAINORANDSCIATICA) rs2319386 1.73000300285495 0.699172198045007 0.0133475505995448
Homemade soup Lower back pain or/and sciatica (finn-b-M13_LOWBACKPAINORANDSCIATICA) rs71371995 1.73428186887137 0.64987502403384 0.007615924600983
Homemade soup Lower back pain or/and sciatica (finn-b-M13_LOWBACKPAINORANDSCIATICA) All - MR Egger 1.04174411788371 0.466396616197786 0.0423419218074644
Homemade soup Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) rs1896796 4.86728208667644 2.40128835590832 0.0426679244398311
Homemade soup Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) rs4660057 5.55212831585441 2.24390045488133 0.013348997919813
Homemade soup Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) rs57169211 7.56971996093422 3.43999142175686 0.0277710518519988
Homemade soup Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) rs6593964 4.52624339432985 2.18082636272257 0.0379428392351341
Homemade soup Other/unspecified synovitis and tenosynovitis (finn-b-M13_TENDOSYNOVITISNAS) All - Inverse variance weighted 1.35663529303396 0.642960531420693 0.0348598869025359
Homemade soup Osteonecrosis due to drugs (finn-b-OSTEON_DRUGS) rs2319386 19.9039982789607 8.86066304830115 0.0246826973770627
Homemade soup Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) rs143428752 8.80572034634335 3.64163231774979 0.0156030926868591
Homemade soup Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) All - MR Egger 7.93000393481769 2.81053282122155 0.0135916906252501
Homemade soup Injuries to the abdomen, lower back, lumbar spine and pelvis (finn-b-ST19_INJURI_ABDOMEN_LOWER_BACK_LUMBAR_SPINE_PELVIS) rs71371995 2.72255335512401 1.09594308786772 0.0129839022585131
Homemade soup Injuries to the abdomen, lower back, lumbar spine and pelvis (finn-b-ST19_INJURI_ABDOMEN_LOWER_BACK_LUMBAR_SPINE_PELVIS) All - MR Egger 2.15298827771367 0.643203691473263 0.0047897366329331
Homemade soup Injuries to the wrist and hand (finn-b-ST19_INJURI_WRIST_HAND) rs71371995 1.56123822341857 0.634493366660258 0.0138702569063494
Homemade soup Injury of muscle and tendon at hip and thigh level (finn-b-ST19_INJURY_MUSCLE_TENDON_HIP_THIGH_LEVEL) rs182666209 -4.2770940421236 2.12698730743444 0.0443392358133194
Homemade soup Injury of muscle and tendon at hip and thigh level (finn-b-ST19_INJURY_MUSCLE_TENDON_HIP_THIGH_LEVEL) All - Inverse variance weighted -1.92673636510507 0.748536750335365 0.0100529198096552
Homemade soup Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) rs143428752 11.2763900838066 3.82555314187857 0.0032019980853235
Homemade soup Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) rs1896796 14.7528254680355 6.20452650044575 0.0174185351569247
Homemade soup Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) All - Inverse variance weighted 4.91782865173336 1.42420285616423 0.0005543079251941
Homemade soup Rheumatoid arthritis (ieu-a-831) All - Inverse variance weighted 1.48093837590112 0.589620205159159 0.0120157355695313
Homemade soup Psoriatic arthritis (ieu-b-5116) rs71371995 -3.498600269179 1.69998077292828 0.0395878838751535
Homemade soup Bone morphogenetic protein 7 (prot-a-257) rs2319386 5.20793650082242 1.79723109882082 0.0037584333193828
Homemade soup Bone morphogenetic protein 7 (prot-a-257) All - Inverse variance weighted 0.950115581422589 0.427914663070748 0.0263957697708814
Homemade soup Fractured bone site(s): Wrist (ukb-a-439) rs2319386 -0.0578385718959668 0.0250596313211217 0.0209970440388487
Homemade soup Fractured bone site(s): Wrist (ukb-a-439) All - Inverse variance weighted -0.0122719186573274 0.0057193016892476 0.0318967394137061
Homemade soup Fractured bone site(s): Other bones (ukb-a-441) rs1896796 0.0967898944583441 0.0394951542863716 0.0142587556393059
Homemade soup Fractured bone site(s): Other bones (ukb-a-441) All - MR Egger -0.0416250979647264 0.0194687903423156 0.0482899861015867
Homemade soup Operative procedures - secondary OPCS: Z84.6 Knee joint (ukb-b-10001) rs1896796 0.0413295516636471 0.0180773876283323 0.0222392354652172
Homemade soup Operative procedures - secondary OPCS: Z84.6 Knee joint (ukb-b-10001) rs71371995 0.0347532782157277 0.0177167083253221 0.0498078676912186
Homemade soup Operative procedures - secondary OPCS: Z84.6 Knee joint (ukb-b-10001) All - Inverse variance weighted 0.0129529997564093 0.0063660407453655 0.0418808048532424
Homemade soup Operative procedures - secondary OPCS: W28.1 Application of internal fixation to bone NEC (ukb-b-10298) All - Inverse variance weighted 0.0110654208754654 0.0046554041025464 0.0174589134116787
Homemade soup Operation code: knee replacement/revision (ukb-b-11120) rs1023349 -0.0341860529986053 0.0160575313807531 0.0332564827588322
Homemade soup Operation code: knee replacement/revision (ukb-b-11120) rs6593964 -0.038478770742833 0.0157737818820943 0.0147111389215481
Homemade soup Operation code: knee replacement/revision (ukb-b-11120) All - Inverse variance weighted -0.0136748274259457 0.0058101428208493 0.0185919581685857
Homemade soup Non-cancer illness code, self-reported: osteoporosis (ukb-b-12141) All - Inverse variance weighted 0.0178318531451019 0.0059709825450052 0.0028226600211897
Homemade soup Operation code: bone surgery/joint surgery (ukb-b-12974) rs1023349 -0.0267889121338912 0.0132011854951185 0.0424296987623569
Homemade soup Operation code: bone surgery/joint surgery (ukb-b-12974) All - Inverse variance weighted -0.0148756473681028 0.0051102876612933 0.0036036428489518
Homemade soup Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) rs1174972 0.0321250266461878 0.0134920444048471 0.0172640830359605
Homemade soup Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) rs4660057 0.0333291754513223 0.0127711831660012 0.009061711921467
Homemade soup Operative procedures - main OPCS: W28.3 Removal of internal fixation from bone NEC (ukb-b-14157) All - Inverse variance weighted 0.0181338869142115 0.0049619354850111 0.0002575837606522
Homemade soup Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) All - Inverse variance weighted -0.0101557048960691 0.0047052825585159 0.0308996676662599
Homemade soup Non-cancer illness code, self-reported: osteopenia (ukb-b-19381) All - Inverse variance weighted -0.0112701508001043 0.0042357528976922 0.0077973859616273
Homemade soup Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) rs1174972 0.0253662962618815 0.0117782709220401 0.0312674761473205
Homemade soup Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) rs4660057 0.0313623390797974 0.0111490668492519 0.0049081459043142
Homemade soup Diagnoses - main ICD10: Z47.0 Follow-up care involving removal of fracture plate and other internal fixation device (ukb-b-19542) All - Inverse variance weighted 0.0154891343805597 0.0046805927514614 0.0009355463287915
Homemade soup Diagnoses - main ICD10: M25.56 Pain in joint (Lower leg) (ukb-b-2083) All - Inverse variance weighted -0.0087003981277728 0.004336306906847 0.04481280285748
Homemade soup Non-cancer illness code, self-reported: spine arthritis/spondylitis (ukb-b-5389) rs2319386 0.0366893300047956 0.0142754379910452 0.0101668610778606
Homemade soup Non-cancer illness code, self-reported: spine arthritis/spondylitis (ukb-b-5389) All - MR Egger 0.100950275789656 0.0373006221336434 0.0424584245431039
Homemade soup Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) rs6593964 0.0248799369852868 0.0098033729330645 0.0111521248568816
Homemade soup Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) All - Inverse variance weighted 0.0091855671134296 0.0041552554384869 0.0270642252963676
Homemade soup Knee pain for 3+ months (ukb-b-8906) rs137972883 -0.27385833261968 0.137154234820587 0.0458558231224053
Homemade soup Knee pain for 3+ months (ukb-b-8906) All - Inverse variance weighted -0.0620456887105698 0.0310360337708012 0.045592120324359
Homemade soup Cervicalgia (ukb-d-M13_CERVICALGIA) rs112195932 -0.0222716511413218 0.0093436487791689 0.0171435781938146
Homemade soup Cervicalgia (ukb-d-M13_CERVICALGIA) rs1896796 0.0187062519771087 0.0094364161849711 0.0474404092306652
Homemade soup Cervicalgia (ukb-d-M13_CERVICALGIA) All - MR Egger -0.0156937493605198 0.0054014106842473 0.0115164009252938
Homemade soup Internal derangement of knee (ukb-e-835_CSA) All - Inverse variance weighted 2.52412778246602 1.13746433259387 0.0264810772379402