ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Flavoured milk (ukb-b-12763)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Flavoured milk (👉 📊) Total body bone mineral density (age 0-15) (ebi-a-GCST005345) MR Egger 21 -2.064887799 0.881935091 0.030269332
Flavoured milk (👉 📊) Total body bone mineral density (age 0-15) (ebi-a-GCST005345) Inverse variance weighted 21 -1.26897694 0.444859017 0.004337172
Flavoured milk (👉 📊) Osteoarthritis (self-reported) (ebi-a-GCST005811) Weighted median 21 1.36591336 0.638494208 0.032413573
Flavoured milk (👉 📊) Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) Inverse variance weighted 21 1.519763814 0.747989838 0.04217417
Flavoured milk (👉 📊) Osteoarthritis (hip) (ebi-a-GCST007091) MR Egger 21 -1.648092019 0.736995831 0.037528231
Flavoured milk (👉 📊) Bone mineral density (ebi-a-GCST90014022) Inverse variance weighted 19 0.139289261 0.068929371 0.043305298
Flavoured milk (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018773) Weighted median 6 3.91321998 1.648680582 0.017618176
Flavoured milk (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018773) Inverse variance weighted 6 3.823393047 1.263040381 0.002468841
Flavoured milk (👉 📊) Heel bone mineral density (ebi-a-GCST90029004) Weighted median 22 0.178328188 0.086912231 0.040187231
Flavoured milk (👉 📊) Benign neoplasm: Short bones of upper limb (finn-b-CD2_BENIGN_BONE_SHORT_UPPER) Inverse variance weighted 20 -5.810898909 2.630798503 0.027188788
Flavoured milk (👉 📊) Benign neoplasm: Short bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SHORT_UPPER_EXALLC) Inverse variance weighted 20 -5.844158885 2.632481497 0.026417479
Flavoured milk (👉 📊) Disorders of synovium and tendon (finn-b-M13_SYNOTEND) MR Egger 20 -1.580444751 0.7182024 0.041063046
Flavoured milk (👉 📊) Burn and corrosion of wrist and hand (finn-b-ST19_BURN_CORROSION_WRIST_HAND) MR Egger 20 -7.711589643 3.537831026 0.042798464
Flavoured milk (👉 📊) Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) Inverse variance weighted 20 0.879590188 0.350527776 0.012096011
Flavoured milk (👉 📊) Injuries to the knee and lower leg (finn-b-ST19_INJURI_KNEE_LOWER_LEG) Weighted median 20 0.714470718 0.339487515 0.035329916
Flavoured milk (👉 📊) Injuries to the knee and lower leg (finn-b-ST19_INJURI_KNEE_LOWER_LEG) Inverse variance weighted 20 0.59273841 0.243429546 0.014893909
Flavoured milk (👉 📊) Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) MR Egger 20 -1.91759048 0.854576042 0.037652868
Flavoured milk (👉 📊) Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) Weighted median 20 -1.402496569 0.712009391 0.048864441
Flavoured milk (👉 📊) Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) Inverse variance weighted 20 -0.902683826 0.455194228 0.047359168
Flavoured milk (👉 📊) Knee and hip osteoarthritis (ieu-a-1170) Wald ratio 1 7.085122785 3.206665272 0.027139972
Flavoured milk (👉 📊) Knee osteoarthritis (ieu-a-1171) Wald ratio 1 11.58910619 4.217180683 0.005994728
Flavoured milk (👉 📊) Femoral neck bone mineral density (ieu-a-980) Inverse variance weighted 22 -0.425913911 0.217020666 0.049698484
Flavoured milk (👉 📊) Bone sialoprotein 2 (prot-a-1395) MR Egger 21 -4.022662812 1.739007555 0.032072621
Flavoured milk (👉 📊) Alkaline phosphatase, bone (prot-c-2795_23_3) Wald ratio 1 -19.55224389 6.698272885 0.003511587
Flavoured milk (👉 📊) Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) MR Egger 21 0.033101955 0.013654762 0.025486767
Flavoured milk (👉 📊) Operative procedures - main OPCS: W40.1 Primary total prosthetic replacement of knee joint using cement (ukb-b-16240) Inverse variance weighted 4 0.045602896 0.017454721 0.0089846
Flavoured milk (👉 📊) Diagnoses - main ICD10: S82 Fracture of lower leg, including ankle (ukb-d-S82) Weighted median 21 -0.023699784 0.011865585 0.045786644
Flavoured milk (👉 📊) Heel bone mineral density (BMD) (left) (ukb-e-4105_CSA) MR Egger 13 -4.970542012 1.621272736 0.010739633
Flavoured milk (👉 📊) Heel bone mineral density (BMD) T-score, automated (left) (ukb-e-4106_CSA) MR Egger 13 -4.955403052 1.63106842 0.011284163
Flavoured milk (👉 📊) Other disorders of synovium, tendon, and bursa (ukb-e-727_AFR) Inverse variance weighted 6 -10.18224311 4.042776082 0.011781354
Flavoured milk (👉 📊) M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_AFR) Weighted median 6 -9.12116533 4.140398637 0.027597011
Flavoured milk (👉 📊) M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_AFR) Inverse variance weighted 6 -7.872833081 3.055169412 0.00996939

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Flavoured milk Total body bone mineral density (age 0-15) (ebi-a-GCST005345) rs138864146 -5.78490665264265 2.22393560837341 0.0092897626057203
Flavoured milk Total body bone mineral density (age 0-15) (ebi-a-GCST005345) rs77140717 -3.03882997475933 1.48372766027395 0.0405497163879058
Flavoured milk Total body bone mineral density (age 0-15) (ebi-a-GCST005345) rs996238 -4.70584793040222 1.88233917216089 0.0124193306515523
Flavoured milk Total body bone mineral density (age 0-15) (ebi-a-GCST005345) All - Inverse variance weighted -1.26897693999425 0.444859017464678 0.0043371722205777
Flavoured milk Total body bone mineral density (age 0-15) (ebi-a-GCST005345) All - MR Egger -2.06488779913052 0.881935090678831 0.0302693322427672
Flavoured milk Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) rs10880014 6.7820613347273 3.43954521693675 0.0486335687337412
Flavoured milk Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) All - Inverse variance weighted 1.51976381425264 0.747989837506333 0.0421741695590239
Flavoured milk Osteoarthritis (hip) (ebi-a-GCST007091) All - MR Egger -1.64809201866315 0.736995831356771 0.0375282313955152
Flavoured milk Bone mineral density (ebi-a-GCST90014022) rs141474325 0.832261781474111 0.308176783082323 0.0069214822445825
Flavoured milk Bone mineral density (ebi-a-GCST90014022) All - Inverse variance weighted 0.139289261308284 0.068929370802999 0.0433052975909976
Flavoured milk Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018773) rs9872037 5.88058053627622 2.49287461758827 0.0183264483646077
Flavoured milk Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018773) All - Inverse variance weighted 3.82339304674392 1.26304038098141 0.0024688412221273
Flavoured milk Heel bone mineral density (ebi-a-GCST90029004) rs141474325 0.550930818632631 0.280587297603942 0.0495890726612021
Flavoured milk Heel bone mineral density (ebi-a-GCST90029004) rs77166451 0.669103554458337 0.273077433569589 0.0142763486577694
Flavoured milk Benign neoplasm: Short bones of upper limb (finn-b-CD2_BENIGN_BONE_SHORT_UPPER) rs77166451 -35.9693132648456 16.0600992806137 0.0251123921521348
Flavoured milk Benign neoplasm: Short bones of upper limb (finn-b-CD2_BENIGN_BONE_SHORT_UPPER) All - Inverse variance weighted -5.81089890865224 2.63079850254159 0.0271887884506659
Flavoured milk Benign neoplasm: Short bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SHORT_UPPER_EXALLC) rs77166451 -36.149823471636 16.070717528072 0.0244856684875972
Flavoured milk Benign neoplasm: Short bones of upper limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_SHORT_UPPER_EXALLC) All - Inverse variance weighted -5.84415888488349 2.63248149703954 0.0264174793287517
Flavoured milk Disorders of synovium and tendon (finn-b-M13_SYNOTEND) All - MR Egger -1.58044475070633 0.718202400094547 0.0410630462494106
Flavoured milk Burn and corrosion of wrist and hand (finn-b-ST19_BURN_CORROSION_WRIST_HAND) rs77140717 -10.0746405853587 4.7561474124525 0.0341551228596344
Flavoured milk Burn and corrosion of wrist and hand (finn-b-ST19_BURN_CORROSION_WRIST_HAND) rs9872037 21.7895653273542 11.0285355758428 0.0481837548156812
Flavoured milk Burn and corrosion of wrist and hand (finn-b-ST19_BURN_CORROSION_WRIST_HAND) All - MR Egger -7.71158964255114 3.53783102630173 0.0427984635282119
Flavoured milk Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) rs148140816 5.21818044316721 2.61506067975656 0.0459955886808101
Flavoured milk Dislocation, sprain and strain of joints and ligaments of knee (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_KNEE) All - Inverse variance weighted 0.879590188453205 0.350527775934451 0.0120960105888167
Flavoured milk Injuries to the knee and lower leg (finn-b-ST19_INJURI_KNEE_LOWER_LEG) rs9872037 3.8909938084561 1.53207881207959 0.0110953128987481
Flavoured milk Injuries to the knee and lower leg (finn-b-ST19_INJURI_KNEE_LOWER_LEG) All - Inverse variance weighted 0.592738409815264 0.243429545839901 0.0148939089375782
Flavoured milk Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) rs181673695 -4.26255245219419 1.70559817146023 0.0124490207499816
Flavoured milk Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) All - Inverse variance weighted -0.902683826232034 0.455194228387332 0.0473591675208347
Flavoured milk Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) All - MR Egger -1.91759048000425 0.85457604172851 0.0376528681636444
Flavoured milk Knee and hip osteoarthritis (ieu-a-1170) rs9872037 7.08512278517337 3.20666527239389 0.0271399719848267
Flavoured milk Knee osteoarthritis (ieu-a-1171) rs9872037 11.5891061900848 4.21718068316124 0.00599472754713
Flavoured milk Femoral neck bone mineral density (ieu-a-980) rs138864146 -2.88884333064441 1.12293149476105 0.0100940448627158
Flavoured milk Femoral neck bone mineral density (ieu-a-980) All - Inverse variance weighted -0.425913910850685 0.217020666270958 0.0496984841753674
Flavoured milk Bone sialoprotein 2 (prot-a-1395) rs146541987 -7.90324512034487 3.46931172580795 0.0227239500359497
Flavoured milk Bone sialoprotein 2 (prot-a-1395) rs148140816 -7.68596982132409 3.42306268583051 0.0247457471420419
Flavoured milk Bone sialoprotein 2 (prot-a-1395) rs77140717 -5.14978944477008 2.62139639103794 0.049469651005598
Flavoured milk Bone sialoprotein 2 (prot-a-1395) rs9544664 -7.09640290260187 3.21934375581451 0.027503177387525
Flavoured milk Bone sialoprotein 2 (prot-a-1395) rs996238 7.21725900206765 3.6671478172668 0.0490582462076129
Flavoured milk Bone sialoprotein 2 (prot-a-1395) All - MR Egger -4.02266281154628 1.73900755517634 0.0320726213758175
Flavoured milk Alkaline phosphatase, bone (prot-c-2795_23_3) rs9872037 -19.5522438874919 6.69827288512327 0.0035115868988518
Flavoured milk Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) rs138864146 0.0624484684259082 0.029537073764245 0.0344947579049226
Flavoured milk Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) All - MR Egger 0.0331019553000311 0.0136547619964524 0.0254867667288377
Flavoured milk Operative procedures - main OPCS: W40.1 Primary total prosthetic replacement of knee joint using cement (ukb-b-16240) rs34654942 0.0942366317032332 0.0330553307785089 0.0043599040953577
Flavoured milk Operative procedures - main OPCS: W40.1 Primary total prosthetic replacement of knee joint using cement (ukb-b-16240) All - Inverse variance weighted 0.0456028957205759 0.017454721479531 0.0089846003335518
Flavoured milk Diagnoses - main ICD10: S82 Fracture of lower leg, including ankle (ukb-d-S82) rs114155753 -0.096787419525557 0.0398389638788245 0.0151210712605657
Flavoured milk Heel bone mineral density (BMD) (left) (ukb-e-4105_CSA) rs34654942 7.21279855056975 3.4937986981592 0.0389743696850644
Flavoured milk Heel bone mineral density (BMD) (left) (ukb-e-4105_CSA) All - MR Egger -4.97054201154882 1.62127273582402 0.0107396326137077
Flavoured milk Heel bone mineral density (BMD) T-score, automated (left) (ukb-e-4106_CSA) All - MR Egger -4.95540305189551 1.63106842011096 0.0112841631096328
Flavoured milk Other disorders of synovium, tendon, and bursa (ukb-e-727_AFR) rs10880014 -25.5096706743335 11.7442063077191 0.0298476063145444
Flavoured milk Other disorders of synovium, tendon, and bursa (ukb-e-727_AFR) All - Inverse variance weighted -10.1822431083266 4.04277608214988 0.0117813544131202
Flavoured milk M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_AFR) rs79169291 -13.1964200759281 4.93947782662976 0.0075485515798993
Flavoured milk M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_AFR) All - Inverse variance weighted -7.87283308102191 3.05516941221293 0.0099693899734501