ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Baked bean (ukb-b-4058)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Baked bean (👉 📊) Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) Weighted median 15 -0.716855187 0.362802866 0.048168289
Baked bean (👉 📊) Osteoarthritis (hospital diagnosed) (ebi-a-GCST005814) Weighted median 15 -0.506897625 0.246507355 0.03975183
Baked bean (👉 📊) Frozen shoulder (ebi-a-GCST90000512) Weighted median 8 0.642709611 0.323672786 0.047069199
Baked bean (👉 📊) Frozen shoulder (ebi-a-GCST90000512) Inverse variance weighted 8 0.618238526 0.248528645 0.012861023
Baked bean (👉 📊) Heel bone mineral density T score (ebi-a-GCST90025982) Inverse variance weighted 2 -0.212707668 0.090895581 0.01927692
Baked bean (👉 📊) Other joint disorder (ebi-a-GCST90038688) Weighted median 14 -0.007810074 0.003479318 0.024786507
Baked bean (👉 📊) Other joint disorder (ebi-a-GCST90038688) Inverse variance weighted 14 -0.006658833 0.002677711 0.012891111
Baked bean (👉 📊) Other specified/unspecified disorders of bone/cartilage (finn-b-M13_BONEDISNAS) Inverse variance weighted 13 2.302604698 1.131529722 0.041856056
Baked bean (👉 📊) Contracture of joint (finn-b-M13_CONTRACTUREJOINT) Inverse variance weighted 13 -4.060755717 2.047581632 0.04734554
Baked bean (👉 📊) Contracture of joint (finn-b-M13_CONTRACTUREJOINT) Simple mode 13 -12.32986978 4.859502802 0.026068791
Baked bean (👉 📊) Radial styloid tenosynovitis [de Quervain] (finn-b-M13_DEQUERVAIN) Inverse variance weighted 13 1.836418763 0.846780049 0.030104851
Baked bean (👉 📊) Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) Inverse variance weighted 13 0.485162012 0.191342432 0.011226469
Baked bean (👉 📊) Rheumatoid arthritis (M13_RHEUMA) (finn-b-M13_RHEUMA) Weighted median 13 0.906274157 0.432837612 0.036278054
Baked bean (👉 📊) Rheumatoid arthritis (M13_RHEUMA_INCLAVO) (finn-b-M13_RHEUMA_INCLAVO) Inverse variance weighted 13 0.615928961 0.311379429 0.047921298
Baked bean (👉 📊) Dislocation, sprain and strain of joints and ligaments at wrist and hand level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_WRIST_HAND_LEVEL) Weighted median 13 -0.995925248 0.502562501 0.047513465
Baked bean (👉 📊) Dislocation, sprain and strain of joints and ligaments at wrist and hand level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_WRIST_HAND_LEVEL) Inverse variance weighted 13 -0.984667238 0.39032971 0.011647257
Baked bean (👉 📊) Dislocation, sprain and strain of joint and ligaments of hip (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINT_LIGAM_HIP) Inverse variance weighted 13 -2.51876373 1.157983098 0.029620379
Baked bean (👉 📊) Fracture of femur (finn-b-ST19_FRACT_FEMUR) Inverse variance weighted 13 -0.889115707 0.435009964 0.04096369
Baked bean (👉 📊) Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) MR Egger 13 -10.7810685 4.56423312 0.037675464
Baked bean (👉 📊) Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) Inverse variance weighted 13 -5.251404271 2.100735562 0.012426586
Baked bean (👉 📊) Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) Inverse variance weighted 13 0.612070529 0.286137767 0.032429486
Baked bean (👉 📊) Superficial injury of shoulder and upper arm (finn-b-ST19_SUPERF_INJURY_SHOUL_UPPER_ARM) Weighted median 13 -1.649105778 0.836717151 0.048732588
Baked bean (👉 📊) Bone sialoprotein 2 (prot-a-1395) Inverse variance weighted 15 0.658452216 0.261711459 0.011871296
Baked bean (👉 📊) Diagnoses - main ICD10: S52 Fracture of forearm (ukb-a-590) Weighted median 14 -0.00976535 0.004707036 0.038020982
Baked bean (👉 📊) Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) Weighted median 14 -0.002172101 0.00098523 0.027477685
Baked bean (👉 📊) Non-cancer illness code self-reported: joint disorder (ukb-a-86) MR Egger 14 0.012256559 0.004518927 0.018875861
Baked bean (👉 📊) Diagnoses - secondary ICD10: M06.99 Rheumatoid arthritis, unspecified (Site unspecified) (ukb-b-11874) Wald ratio 1 -0.012428699 0.0062029 0.045103092
Baked bean (👉 📊) Operative procedures - secondary OPCS: S06.5 Excision of lesion of skin of head or neck NEC (ukb-b-12747) Wald ratio 1 0.012173995 0.005607773 0.029937662
Baked bean (👉 📊) Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) Weighted median 4 -0.011918752 0.005474818 0.029479575
Baked bean (👉 📊) Operative procedures - secondary OPCS: Z84.3 Hip joint (ukb-b-17133) Weighted median 4 -0.013192635 0.005659426 0.01974859
Baked bean (👉 📊) Non-cancer illness code, self-reported: ankylosing spondylitis (ukb-b-18194) Wald ratio 1 0.012958562 0.005723936 0.023578728
Baked bean (👉 📊) Operative procedures - main OPCS: W58.1 Primary resurfacing arthroplasty of joint (ukb-b-6725) Wald ratio 1 -0.014033433 0.00583198 0.016115484
Baked bean (👉 📊) Fractured heel (left) (ukb-b-8221) MR Egger 15 0.021688946 0.009567469 0.041099925
Baked bean (👉 📊) Operative procedures - main OPCS: W37.1 Primary total prosthetic replacement of hip joint using cement (ukb-b-898) Weighted median 4 -0.012110913 0.005632767 0.031548692
Baked bean (👉 📊) Operative procedures - main OPCS: W37.1 Primary total prosthetic replacement of hip joint using cement (ukb-b-898) Inverse variance weighted 4 -0.013348896 0.00467642 0.004310305
Baked bean (👉 📊) Ankle spacing width (ukb-e-3143_CSA) MR Egger 9 -3.493455535 1.308717863 0.032028812
Baked bean (👉 📊) Ankle spacing width (ukb-e-3143_EAS) MR Egger 7 -4.305255668 1.6297554 0.045884563
Baked bean (👉 📊) Ankle spacing width (left) (ukb-e-4100_AFR) Weighted median 7 -0.827576719 0.413851377 0.045533159
Baked bean (👉 📊) Ankle spacing width (left) (ukb-e-4100_AFR) Inverse variance weighted 7 -0.751537153 0.369813501 0.042132823
Baked bean (👉 📊) Ankle spacing width (right) (ukb-e-4119_AFR) Inverse variance weighted 7 -0.79927522 0.333844341 0.016658691
Baked bean (👉 📊) Ankle spacing width (right) (ukb-e-4119_AFR) Simple mode 7 -1.688976944 0.613072759 0.033074849

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Baked bean Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) rs9824684 -0.988598044107692 0.44654985554874 0.0268385373198942
Baked bean Frozen shoulder (ebi-a-GCST90000512) rs114412661 1.34397732424418 0.674408255106412 0.0462806630313764
Baked bean Frozen shoulder (ebi-a-GCST90000512) All - Inverse variance weighted 0.618238525955287 0.248528645018721 0.0128610228494815
Baked bean Heel bone mineral density T score (ebi-a-GCST90025982) rs4894011 -0.315829254983544 0.0998124243302696 0.0015549499894286
Baked bean Heel bone mineral density T score (ebi-a-GCST90025982) All - Inverse variance weighted -0.212707667604779 0.0908955814152215 0.0192769203266206
Baked bean Other joint disorder (ebi-a-GCST90038688) All - Inverse variance weighted -0.0066588325624762 0.0026777105793582 0.0128911114687716
Baked bean Other specified/unspecified disorders of bone/cartilage (finn-b-M13_BONEDISNAS) All - Inverse variance weighted 2.30260469799736 1.13152972183692 0.0418560562653913
Baked bean Contracture of joint (finn-b-M13_CONTRACTUREJOINT) rs112608234 -15.8009740400922 7.49916655795684 0.0351149199480322
Baked bean Contracture of joint (finn-b-M13_CONTRACTUREJOINT) rs4894011 -12.6954623740259 5.98536909776103 0.0339148501739319
Baked bean Contracture of joint (finn-b-M13_CONTRACTUREJOINT) rs78813271 -17.9708099499831 9.09030224718565 0.0480505539445398
Baked bean Contracture of joint (finn-b-M13_CONTRACTUREJOINT) All - Inverse variance weighted -4.06075571718748 2.04758163231423 0.0473455397535632
Baked bean Radial styloid tenosynovitis [de Quervain] (finn-b-M13_DEQUERVAIN) rs73408360 5.57736470384332 2.83027860825859 0.0487689316331558
Baked bean Radial styloid tenosynovitis [de Quervain] (finn-b-M13_DEQUERVAIN) All - Inverse variance weighted 1.83641876337567 0.846780049167183 0.0301048509831791
Baked bean Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) rs114412661 1.31637504003194 0.48662205271323 0.0068278032316776
Baked bean Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) rs9956645 1.45992422134512 0.621755962502276 0.0188711619676748
Baked bean Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) All - Inverse variance weighted 0.485162012012544 0.19134243222409 0.0112264688142747
Baked bean Rheumatoid arthritis (M13_RHEUMA_INCLAVO) (finn-b-M13_RHEUMA_INCLAVO) All - Inverse variance weighted 0.615928960626798 0.311379429338904 0.0479212983806174
Baked bean Dislocation, sprain and strain of joints and ligaments at wrist and hand level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_WRIST_HAND_LEVEL) rs114412661 -2.86774278073309 0.908777081349066 0.0016016483245253
Baked bean Dislocation, sprain and strain of joints and ligaments at wrist and hand level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_WRIST_HAND_LEVEL) rs148676637 -2.18486491467891 1.0789930422228 0.0428765005938361
Baked bean Dislocation, sprain and strain of joints and ligaments at wrist and hand level (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_WRIST_HAND_LEVEL) All - Inverse variance weighted -0.984667237777317 0.390329710176471 0.011647257132115
Baked bean Dislocation, sprain and strain of joint and ligaments of hip (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINT_LIGAM_HIP) All - Inverse variance weighted -2.51876372957191 1.15798309810615 0.0296203789322191
Baked bean Fracture of femur (finn-b-ST19_FRACT_FEMUR) rs11610708 -3.25276875676576 1.22304105254393 0.0078239431943216
Baked bean Fracture of femur (finn-b-ST19_FRACT_FEMUR) rs73408360 -3.39009489145977 1.26695264092898 0.0074554100473065
Baked bean Fracture of femur (finn-b-ST19_FRACT_FEMUR) All - Inverse variance weighted -0.889115707360228 0.43500996409405 0.0409636902451805
Baked bean Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) rs114412661 -10.6183427399733 5.24886350875296 0.0430752716510284
Baked bean Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) All - Inverse variance weighted -5.25140427095711 2.10073556193408 0.0124265855996879
Baked bean Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) All - MR Egger -10.7810685023894 4.56423312011624 0.0376754644983586
Baked bean Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) All - Inverse variance weighted 0.612070529020552 0.286137766745963 0.032429485617548
Baked bean Superficial injury of shoulder and upper arm (finn-b-ST19_SUPERF_INJURY_SHOUL_UPPER_ARM) rs12540361 -4.64837692641234 1.73808876378896 0.0074858945750417
Baked bean Superficial injury of shoulder and upper arm (finn-b-ST19_SUPERF_INJURY_SHOUL_UPPER_ARM) rs4609980 10.1389893606375 3.61555331261312 0.0050430581660405
Baked bean Bone sialoprotein 2 (prot-a-1395) All - Inverse variance weighted 0.658452216330442 0.261711458538728 0.0118712959372734
Baked bean Diagnoses - main ICD10: S52 Fracture of forearm (ukb-a-590) rs11610708 -0.0274097031393122 0.0124657028062287 0.0278914856439246
Baked bean Diagnoses - main ICD10: S52 Fracture of forearm (ukb-a-590) rs12540361 0.027942257237137 0.0123709294549089 0.0239018568604107
Baked bean Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs114412661 0.0064029480146236 0.002547112917112 0.011943607676209
Baked bean Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs148676637 0.0083376595450566 0.002455473297802 0.0006849318725588
Baked bean Non-cancer illness code self-reported: joint disorder (ukb-a-86) rs12540361 -0.0222757938986838 0.008721273765516 0.01064350310795
Baked bean Non-cancer illness code self-reported: joint disorder (ukb-a-86) All - MR Egger 0.0122565592315273 0.0045189268989216 0.0188758605805351
Baked bean Diagnoses - secondary ICD10: M06.99 Rheumatoid arthritis, unspecified (Site unspecified) (ukb-b-11874) rs11610708 -0.0124286993088517 0.006202899908402 0.0451030916685041
Baked bean Operative procedures - secondary OPCS: S06.5 Excision of lesion of skin of head or neck NEC (ukb-b-12747) rs11610708 0.0121739945041219 0.0056077733366641 0.0299376622731737
Baked bean Diagnoses - secondary ICD10: M13.99 Arthritis, unspecified (Site unspecified) (ukb-b-15026) rs12540361 -0.0179697800380689 0.0083004578559407 0.0303942476963217
Baked bean Operative procedures - secondary OPCS: Z84.3 Hip joint (ukb-b-17133) rs12540361 -0.0189157706751722 0.0080105681676208 0.0182084412669646
Baked bean Operative procedures - secondary OPCS: Z84.3 Hip joint (ukb-b-17133) rs9956645 -0.0226280697053701 0.0078634953677463 0.0040070069906688
Baked bean Non-cancer illness code, self-reported: ankylosing spondylitis (ukb-b-18194) rs11610708 0.0129585623282538 0.0057239362145057 0.0235787276692528
Baked bean Operative procedures - main OPCS: W58.1 Primary resurfacing arthroplasty of joint (ukb-b-6725) rs11610708 -0.0140334332583895 0.0058319801815305 0.0161154839270823
Baked bean Fractured heel (left) (ukb-b-8221) All - MR Egger 0.0216889459838505 0.0095674685752 0.0410999249913698
Baked bean Operative procedures - main OPCS: W37.1 Primary total prosthetic replacement of hip joint using cement (ukb-b-898) rs12540361 -0.0203438696543665 0.0093700622478301 0.0299193596484116
Baked bean Operative procedures - main OPCS: W37.1 Primary total prosthetic replacement of hip joint using cement (ukb-b-898) rs9956645 -0.0205964048077881 0.0091981752664791 0.0251439611581745
Baked bean Operative procedures - main OPCS: W37.1 Primary total prosthetic replacement of hip joint using cement (ukb-b-898) All - Inverse variance weighted -0.0133488963958255 0.0046764203752614 0.0043103052125579
Baked bean Ankle spacing width (ukb-e-3143_CSA) rs4609980 -2.64482942994633 1.32098507744346 0.0452670421241535
Baked bean Ankle spacing width (ukb-e-3143_CSA) All - MR Egger -3.49345553487343 1.30871786313055 0.0320288116634599
Baked bean Ankle spacing width (ukb-e-3143_EAS) All - MR Egger -4.30525566832663 1.62975540015157 0.0458845625018085
Baked bean Ankle spacing width (left) (ukb-e-4100_AFR) rs4609980 -1.08552377630176 0.521817698340763 0.0375004106721145
Baked bean Ankle spacing width (left) (ukb-e-4100_AFR) All - Inverse variance weighted -0.751537152836939 0.369813500879509 0.0421328228577398
Baked bean Ankle spacing width (right) (ukb-e-4119_AFR) rs4894011 -2.22703476970823 1.080265334311 0.0392493838451102
Baked bean Ankle spacing width (right) (ukb-e-4119_AFR) All - Inverse variance weighted -0.799275220442453 0.333844340708374 0.0166586905047814