ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Milk chocolate (ukb-b-4569)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Milk chocolate (👉 📊) Osteoporosis (bbj-a-137) Inverse variance weighted 8 0.530121533 0.259878962 0.041362419
Milk chocolate (👉 📊) Heel bone mineral density T score (ebi-a-GCST90025982) Weighted median 6 -0.143213059 0.069226137 0.038567534
Milk chocolate (👉 📊) Heel bone mineral density T score (ebi-a-GCST90025982) Inverse variance weighted 6 -0.163426907 0.061307889 0.007683393
Milk chocolate (👉 📊) Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) Inverse variance weighted 14 5.175632039 2.26200023 0.022133003
Milk chocolate (👉 📊) Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) Inverse variance weighted 14 5.203766583 2.265612131 0.021627445
Milk chocolate (👉 📊) Benign neoplasm of bone and articular cartilage (finn-b-CD2_BENIGN_BONE_CARTILAGE) Weighted median 14 1.907910471 0.972887621 0.04986969
Milk chocolate (👉 📊) Benign neoplasm of bone and articular cartilage (finn-b-CD2_BENIGN_BONE_CARTILAGE) Inverse variance weighted 14 2.112634972 0.724243155 0.003533881
Milk chocolate (👉 📊) Benign neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-CD2_BENIGN_BONE_CARTILAGE_EXALLC) Inverse variance weighted 14 2.114762376 0.72589545 0.003576132
Milk chocolate (👉 📊) Benign neoplasm: Long bones of lower limb (finn-b-CD2_BENIGN_BONE_LONG_LOWER) Weighted median 14 4.30661949 1.685493413 0.010615453
Milk chocolate (👉 📊) Benign neoplasm: Long bones of lower limb (finn-b-CD2_BENIGN_BONE_LONG_LOWER) Inverse variance weighted 14 3.686571393 1.272704423 0.003771777
Milk chocolate (👉 📊) Benign neoplasm: Long bones of lower limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_LONG_LOWER_EXALLC) Weighted median 14 4.238394777 1.713105012 0.013357194
Milk chocolate (👉 📊) Benign neoplasm: Long bones of lower limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_LONG_LOWER_EXALLC) Inverse variance weighted 14 3.692826602 1.272043653 0.003695288
Milk chocolate (👉 📊) Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) MR Egger 14 4.770856917 1.824832555 0.022617008
Milk chocolate (👉 📊) Infective bursitis (finn-b-M13_INFBURSA) Inverse variance weighted 14 3.436006662 1.267870946 0.006727099
Milk chocolate (👉 📊) Other juvenile arthritis (finn-b-M13_JUVEARTH) MR Egger 14 6.126448465 2.642702576 0.038890312
Milk chocolate (👉 📊) Tibial collateral bursitis [Pellegrini-Stieda] (finn-b-M13_TIBIALCOLLATERAL) Weighted median 14 -8.106311379 2.870495239 0.004742669
Milk chocolate (👉 📊) Tibial collateral bursitis [Pellegrini-Stieda] (finn-b-M13_TIBIALCOLLATERAL) Inverse variance weighted 14 -6.62208876 2.11877456 0.001775433
Milk chocolate (👉 📊) Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) Weighted median 14 6.136197117 2.744111621 0.025343095
Milk chocolate (👉 📊) Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) Weighted median 14 -4.50864804 2.140070697 0.035137063
Milk chocolate (👉 📊) Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) Weighted median 14 1.600910448 0.771417085 0.037960112
Milk chocolate (👉 📊) Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) Inverse variance weighted 14 1.483652515 0.583109083 0.010947115
Milk chocolate (👉 📊) Superficial injury of wrist and hand (finn-b-ST19_SUPERF_INJURY_WRIST_HAND) Inverse variance weighted 14 -1.260551457 0.497202147 0.011235438
Milk chocolate (👉 📊) Psoriatic arthritis (ieu-b-5116) MR Egger 15 -3.056796124 0.871867455 0.00386903
Milk chocolate (👉 📊) Psoriatic arthritis (ieu-b-5116) Inverse variance weighted 15 -0.804624963 0.385288177 0.03676431
Milk chocolate (👉 📊) Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) Weighted median 16 -0.0273285 0.013471795 0.042501956
Milk chocolate (👉 📊) Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) Inverse variance weighted 16 -0.027459451 0.010160767 0.006882063
Milk chocolate (👉 📊) Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) MR Egger 16 0.018564838 0.007105954 0.02046996
Milk chocolate (👉 📊) Diagnoses - main ICD10: M24 Other specific joint derangements (ukb-a-567) Weighted median 16 0.006216042 0.002465848 0.011707042
Milk chocolate (👉 📊) Diagnoses - main ICD10: M24 Other specific joint derangements (ukb-a-567) Inverse variance weighted 16 0.00447373 0.00182985 0.014490765
Milk chocolate (👉 📊) Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) Inverse variance weighted 16 0.001700015 0.00082138 0.03847982
Milk chocolate (👉 📊) Heel bone mineral density (BMD) (left) (ukb-b-1096) Weighted median 16 0.154781623 0.076531594 0.043129479
Milk chocolate (👉 📊) Operative procedures - secondary OPCS: Z81.4 Shoulder joint (ukb-b-11427) Weighted median 6 0.014126901 0.006842321 0.038957476
Milk chocolate (👉 📊) Operative procedures - secondary OPCS: Z81.4 Shoulder joint (ukb-b-11427) Inverse variance weighted 6 0.018597985 0.005258221 0.0004048
Milk chocolate (👉 📊) Diagnoses - main ICD10: M75.4 Impingement syndrome of shoulder (ukb-b-1418) Weighted median 5 0.014762017 0.006257592 0.018321441
Milk chocolate (👉 📊) Diagnoses - main ICD10: M75.4 Impingement syndrome of shoulder (ukb-b-1418) Inverse variance weighted 5 0.01452219 0.004460135 0.001129945
Milk chocolate (👉 📊) Diagnoses - main ICD10: M65 Synovitis and tenosynovitis (ukb-d-M65) Weighted median 16 0.009469072 0.004273704 0.026714857
Milk chocolate (👉 📊) Diagnoses - main ICD10: M65 Synovitis and tenosynovitis (ukb-d-M65) Inverse variance weighted 16 0.006777005 0.003169795 0.032517186
Milk chocolate (👉 📊) Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) Weighted median 16 -0.007335392 0.003559308 0.039312227
Milk chocolate (👉 📊) Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) Inverse variance weighted 16 -0.005886988 0.0025307 0.020006317
Milk chocolate (👉 📊) Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) Weighted median 16 -0.00713076 0.003592688 0.047166964
Milk chocolate (👉 📊) Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) Inverse variance weighted 16 -0.00606589 0.00254552 0.017173719
Milk chocolate (👉 📊) Ankle spacing width (ukb-e-3143_CSA) MR Egger 12 2.036999365 0.806141362 0.030032566
Milk chocolate (👉 📊) Ankle spacing width (ukb-e-3143_CSA) Weighted median 12 1.290926799 0.519018089 0.012873556
Milk chocolate (👉 📊) Ankle spacing width (ukb-e-3143_CSA) Inverse variance weighted 12 0.886115514 0.388810442 0.02266454
Milk chocolate (👉 📊) Heel bone mineral density (BMD) (ukb-e-3148_CSA) Weighted median 12 -1.140703781 0.569816808 0.045297845
Milk chocolate (👉 📊) Heel bone mineral density (BMD) (ukb-e-3148_CSA) Inverse variance weighted 12 -0.982937983 0.479104025 0.040206894
Milk chocolate (👉 📊) Heel bone mineral density (BMD) (right) (ukb-e-4124_AFR) Simple mode 8 -3.087742691 1.053478363 0.021993039
Milk chocolate (👉 📊) Heel bone mineral density (BMD) T-score, automated (right) (ukb-e-4125_AFR) Simple mode 8 -3.358026659 1.059860626 0.015743642
Milk chocolate (👉 📊) Osteoarthrosis (ukb-e-740_CSA) Weighted median 12 -2.847284299 1.43042646 0.046534312
Milk chocolate (👉 📊) Heel bone mineral density (BMD) T-score, automated (ukb-e-78_p1_CSA) Inverse variance weighted 12 -0.947856822 0.470162064 0.043797729
Milk chocolate (👉 📊) Open wounds of head; neck; and trunk (ukb-e-870_CSA) Weighted median 12 3.816276406 1.767172726 0.030808463

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Milk chocolate Osteoporosis (bbj-a-137) All - Inverse variance weighted 0.530121532916094 0.259878962165327 0.0413624189189552
Milk chocolate Heel bone mineral density T score (ebi-a-GCST90025982) rs112748887 -0.41542781417375 0.117812679656618 0.0004216124875991
Milk chocolate Heel bone mineral density T score (ebi-a-GCST90025982) rs189232607 -0.256380765964404 0.112172730286612 0.0222783103729759
Milk chocolate Heel bone mineral density T score (ebi-a-GCST90025982) All - Inverse variance weighted -0.163426906515115 0.0613078888009839 0.0076833930684414
Milk chocolate Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) All - Inverse variance weighted 5.17563203942 2.26200022987676 0.0221330029169139
Milk chocolate Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) All - Inverse variance weighted 5.20376658272706 2.26561213141008 0.0216274450254005
Milk chocolate Benign neoplasm of bone and articular cartilage (finn-b-CD2_BENIGN_BONE_CARTILAGE) rs73185404 14.049634461739 6.36382766415281 0.027262867751048
Milk chocolate Benign neoplasm of bone and articular cartilage (finn-b-CD2_BENIGN_BONE_CARTILAGE) All - Inverse variance weighted 2.11263497201274 0.724243155151301 0.0035338810033401
Milk chocolate Benign neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-CD2_BENIGN_BONE_CARTILAGE_EXALLC) rs73185404 14.2464888641501 6.38928297480942 0.0257641988388579
Milk chocolate Benign neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-CD2_BENIGN_BONE_CARTILAGE_EXALLC) All - Inverse variance weighted 2.11476237636667 0.725895449765544 0.0035761323010138
Milk chocolate Benign neoplasm: Long bones of lower limb (finn-b-CD2_BENIGN_BONE_LONG_LOWER) rs189232607 15.0913062631419 6.97796932690867 0.0305636875822526
Milk chocolate Benign neoplasm: Long bones of lower limb (finn-b-CD2_BENIGN_BONE_LONG_LOWER) rs2129730 9.24017517151871 4.24052208622259 0.0293303097603551
Milk chocolate Benign neoplasm: Long bones of lower limb (finn-b-CD2_BENIGN_BONE_LONG_LOWER) All - Inverse variance weighted 3.68657139302728 1.27270442257272 0.0037717772091663
Milk chocolate Benign neoplasm: Long bones of lower limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_LONG_LOWER_EXALLC) rs189232607 15.3592530189425 7.05176822151476 0.0294007390295346
Milk chocolate Benign neoplasm: Long bones of lower limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_LONG_LOWER_EXALLC) rs2129730 9.31772081120902 4.24460343567997 0.0281498058375997
Milk chocolate Benign neoplasm: Long bones of lower limb (all cancers excluded) (finn-b-CD2_BENIGN_BONE_LONG_LOWER_EXALLC) All - Inverse variance weighted 3.69282660224933 1.2720436525169 0.0036952882250297
Milk chocolate Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) rs114672176 7.09809105876161 2.23240242611192 0.0014749116992204
Milk chocolate Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) rs2065134 -7.36140711888489 3.22138115185811 0.0223027969196008
Milk chocolate Ankylosing spondylitis (finn-b-M13_ANKYLOSPON) All - MR Egger 4.77085691690249 1.82483255534935 0.0226170080249418
Milk chocolate Infective bursitis (finn-b-M13_INFBURSA) rs112748887 12.7338987069596 4.6170735905989 0.0058155822447217
Milk chocolate Infective bursitis (finn-b-M13_INFBURSA) rs13036311 10.6296894131005 3.88074750992429 0.0061610822955452
Milk chocolate Infective bursitis (finn-b-M13_INFBURSA) All - Inverse variance weighted 3.4360066619034 1.26787094598586 0.0067270985575825
Milk chocolate Other juvenile arthritis (finn-b-M13_JUVEARTH) rs62108673 -11.1543109336416 3.95628644985026 0.0048115152478148
Milk chocolate Other juvenile arthritis (finn-b-M13_JUVEARTH) All - MR Egger 6.12644846542888 2.64270257627166 0.0388903119380861
Milk chocolate Tibial collateral bursitis [Pellegrini-Stieda] (finn-b-M13_TIBIALCOLLATERAL) All - Inverse variance weighted -6.62208876012734 2.1187745598924 0.0017754327250673
Milk chocolate Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) rs114672176 12.8344013366873 6.21981895966069 0.0390681248365727
Milk chocolate Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) rs1899433 -14.5754150955711 6.49692977391287 0.0248690204726577
Milk chocolate Burn and corrosion of ankle and foot (finn-b-ST19_BURN_CORROSION_ANKLE_FOOT) rs62108673 17.679819261283 7.48699626963695 0.0182059090586114
Milk chocolate Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) rs2065134 16.6254297216302 7.30424699705217 0.0228381152784547
Milk chocolate Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) rs4708314 11.4865662247748 5.51217497344715 0.0371734767686771
Milk chocolate Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) rs62108673 -13.6184521620344 5.82672200914202 0.0194266690208271
Milk chocolate Dislocation, sprain and strain of joints and ligaments of lumbar spine and pelvis (finn-b-ST19_DISLO_SPRAIN_STRAIN_JOINTS_LIGAM_LUMBAR_SPINE_PELVIS) rs73185404 45.6396749865935 14.9168120447742 0.0022162301861416
Milk chocolate Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) rs78656169 4.32003423202159 1.40679540798532 0.0021346226836822
Milk chocolate Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) All - Inverse variance weighted 1.48365251491886 0.583109083078976 0.0109471152465991
Milk chocolate Superficial injury of wrist and hand (finn-b-ST19_SUPERF_INJURY_WRIST_HAND) All - Inverse variance weighted -1.26055145689667 0.497202147278999 0.0112354383635169
Milk chocolate Psoriatic arthritis (ieu-b-5116) rs149550488 -2.86599093452602 1.10859013828859 0.0097306304349094
Milk chocolate Psoriatic arthritis (ieu-b-5116) All - Inverse variance weighted -0.804624962669205 0.385288177325878 0.0367643096484029
Milk chocolate Psoriatic arthritis (ieu-b-5116) All - MR Egger -3.05679612350459 0.871867454546423 0.0038690299242927
Milk chocolate Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) All - Inverse variance weighted -0.0274594507878014 0.010160766976727 0.0068820631996856
Milk chocolate Non-cancer illness code self-reported: arthritis (nos) (ukb-a-113) All - MR Egger 0.0185648377453002 0.0071059542721441 0.0204699597334997
Milk chocolate Diagnoses - main ICD10: M24 Other specific joint derangements (ukb-a-567) rs13036311 0.0158178590644687 0.0074945877129433 0.0348092073175693
Milk chocolate Diagnoses - main ICD10: M24 Other specific joint derangements (ukb-a-567) All - Inverse variance weighted 0.0044737303224412 0.0018298499651713 0.014490764747372
Milk chocolate Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs2129730 0.0074467894064493 0.0029889068921748 0.0127213607049293
Milk chocolate Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) rs78656169 0.0067477234826392 0.0030119782767342 0.0250716999008988
Milk chocolate Diagnoses - main ICD10: S76 Injury of muscle and tendon at hip and thigh level (ukb-a-592) All - Inverse variance weighted 0.0017000153484878 0.0008213798387361 0.0384798197492801
Milk chocolate Heel bone mineral density (BMD) (left) (ukb-b-1096) rs112748887 -0.762401787715304 0.219129917922301 0.0005028704771824
Milk chocolate Heel bone mineral density (BMD) (left) (ukb-b-1096) rs73185404 0.442528696620214 0.221505325250989 0.0457357240110442
Milk chocolate Operative procedures - secondary OPCS: Z81.4 Shoulder joint (ukb-b-11427) rs13036311 0.0339941619322394 0.0113607188703466 0.0027692531635187
Milk chocolate Operative procedures - secondary OPCS: Z81.4 Shoulder joint (ukb-b-11427) rs4708314 0.032418472916093 0.011259391841391 0.0039863691451781
Milk chocolate Operative procedures - secondary OPCS: Z81.4 Shoulder joint (ukb-b-11427) All - Inverse variance weighted 0.0185979845338805 0.0052582211334692 0.0004047998115837
Milk chocolate Diagnoses - main ICD10: M75.4 Impingement syndrome of shoulder (ukb-b-1418) rs13036311 0.0214277846269864 0.0101524337286103 0.0348062162269554
Milk chocolate Diagnoses - main ICD10: M75.4 Impingement syndrome of shoulder (ukb-b-1418) rs4708314 0.0252394673694977 0.0100620058219582 0.0121281611769057
Milk chocolate Diagnoses - main ICD10: M75.4 Impingement syndrome of shoulder (ukb-b-1418) All - Inverse variance weighted 0.0145221897105011 0.0044601347050833 0.001129945446754
Milk chocolate Diagnoses - main ICD10: M65 Synovitis and tenosynovitis (ukb-d-M65) All - Inverse variance weighted 0.0067770047661849 0.003169795169399 0.0325171863514227
Milk chocolate Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) rs149550488 -0.0206903899958884 0.0096030846679168 0.0311965438885974
Milk chocolate Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) rs4708314 -0.0202465973014437 0.0102617914322804 0.0484946429950981
Milk chocolate Diagnoses - main ICD10: S42 Fracture of shoulder and upper arm (ukb-d-S42) All - Inverse variance weighted -0.0058869884762624 0.0025306999108131 0.0200063172841746
Milk chocolate Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) rs114672176 -0.0191348560796626 0.0092490008507304 0.038559549040873
Milk chocolate Diagnoses - main ICD10: S72 Fracture of femur (ukb-d-S72) All - Inverse variance weighted -0.0060658903594281 0.0025455197478422 0.0171737190521077
Milk chocolate Ankle spacing width (ukb-e-3143_CSA) rs112748887 3.95934766580377 1.70521536057997 0.0202380643554937
Milk chocolate Ankle spacing width (ukb-e-3143_CSA) rs899452 1.43929483838692 0.690513305932564 0.037125258391952
Milk chocolate Ankle spacing width (ukb-e-3143_CSA) All - Inverse variance weighted 0.886115513715644 0.388810442074496 0.0226645402870448
Milk chocolate Ankle spacing width (ukb-e-3143_CSA) All - MR Egger 2.03699936544372 0.806141361617862 0.0300325660704081
Milk chocolate Heel bone mineral density (BMD) (ukb-e-3148_CSA) rs13036311 -4.53318759347052 2.02552989573669 0.0252193911179805
Milk chocolate Heel bone mineral density (BMD) (ukb-e-3148_CSA) rs899452 -1.92911937209602 0.766540573605422 0.0118474247088719
Milk chocolate Heel bone mineral density (BMD) (ukb-e-3148_CSA) All - Inverse variance weighted -0.982937982591035 0.479104024501753 0.040206894439329
Milk chocolate Heel bone mineral density (BMD) T-score, automated (right) (ukb-e-4125_AFR) rs78656169 -4.23210951902251 1.98504693714262 0.0330072835139061
Milk chocolate Osteoarthrosis (ukb-e-740_CSA) rs4708314 -8.403485307423 3.33041579796231 0.0116274349881218
Milk chocolate Osteoarthrosis (ukb-e-740_CSA) rs62108673 7.7549519256029 3.57957232175695 0.0302770839502837
Milk chocolate Osteoarthrosis (ukb-e-740_CSA) rs899452 -4.41306368995732 1.73295741428361 0.0108793447308483
Milk chocolate Heel bone mineral density (BMD) T-score, automated (ukb-e-78_p1_CSA) rs13036311 -4.32559302143308 2.01832763507416 0.0321004928944976
Milk chocolate Heel bone mineral density (BMD) T-score, automated (ukb-e-78_p1_CSA) rs899452 -1.93376225867146 0.763986985988929 0.0113690660663056
Milk chocolate Heel bone mineral density (BMD) T-score, automated (ukb-e-78_p1_CSA) All - Inverse variance weighted -0.947856822214434 0.470162063694792 0.043797729115943