ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Cucumber (ukb-b-588)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Cucumber (👉 📊) Rheumatoid Arthritis (bbj-a-74) Weighted median 10 0.757889749 0.358080721 0.034299481
Cucumber (👉 📊) Rheumatoid arthritis (ebi-a-GCST002318) Weighted median 9 0.720785066 0.360241171 0.045409599
Cucumber (👉 📊) Total body bone mineral density (age 0-15) (ebi-a-GCST005345) MR Egger 17 -0.697449573 0.304448699 0.036869496
Cucumber (👉 📊) Neck injury (ebi-a-GCST90038700) Weighted median 15 0.006481798 0.002919278 0.026395497
Cucumber (👉 📊) Fractures (ebi-a-GCST90038703) MR Egger 15 -0.0129836 0.006001003 0.049707988
Cucumber (👉 📊) Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) MR Egger 17 4.926342665 2.20587736 0.041188493
Cucumber (👉 📊) Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) MR Egger 17 4.999643432 2.2106243 0.039005137
Cucumber (👉 📊) Adhesive capsulitis of shoulder (finn-b-M13_ADHCAPSULITIS) Inverse variance weighted 17 0.586439477 0.253861371 0.020883856
Cucumber (👉 📊) Bicipital tendinitis (finn-b-M13_BICIPITALTEND) Inverse variance weighted 17 1.327889179 0.530509661 0.012313013
Cucumber (👉 📊) Chondromalacia (finn-b-M13_CHONDROMALACIA) MR Egger 17 3.323055802 1.167560283 0.012261522
Cucumber (👉 📊) Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) Weighted median 17 -2.895356338 1.299847613 0.025916661
Cucumber (👉 📊) Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) Inverse variance weighted 17 -1.949098076 0.942284766 0.038594821
Cucumber (👉 📊) Impingement syndrome of shoulder (finn-b-M13_IMPINGEMENT) Inverse variance weighted 17 0.476571436 0.232713196 0.040570606
Cucumber (👉 📊) Loose body in joint (finn-b-M13_LOOSEJOINT) MR Egger 17 -2.943629421 1.274669576 0.035576749
Cucumber (👉 📊) Pathological/recurrent dislocation and subluxation of joint, not elsewhere classified (finn-b-M13_PATHODISLOCATIO) MR Egger 17 -1.774731087 0.707112872 0.024034847
Cucumber (👉 📊) Pyogenic arthritis (finn-b-M13_PYOGARTH) Inverse variance weighted 17 0.82138537 0.409394498 0.044819773
Cucumber (👉 📊) Shoulder lesions (finn-b-M13_SHOULDER) Inverse variance weighted 17 0.303620205 0.115424956 0.008527054
Cucumber (👉 📊) Injuries to the neck (finn-b-ST19_INJURI_NECK) Inverse variance weighted 17 -0.500329916 0.235726085 0.03379531
Cucumber (👉 📊) Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) Inverse variance weighted 17 -0.762386278 0.290182417 0.008607412
Cucumber (👉 📊) Injury of nerves at shoulder and upper arm level (finn-b-ST19_INJURY_NERVES_SHOUL_UPPER_ARM_LEVEL) MR Egger 17 6.360498399 2.11399216 0.008814055
Cucumber (👉 📊) Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) Weighted mode 17 -5.000554736 2.332714371 0.047771018
Cucumber (👉 📊) Osteomyelitis (ieu-b-4975) MR Egger 17 -1.055068059 0.430495242 0.026997634
Cucumber (👉 📊) Bone sialoprotein 2 (prot-a-1396) MR Egger 17 -1.15642405 0.477004287 0.028437177
Cucumber (👉 📊) Alkaline phosphatase, bone (prot-c-2795_23_3) Wald ratio 1 3.451207923 1.591151498 0.030082668
Cucumber (👉 📊) Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) Inverse variance weighted 16 -0.018401299 0.007365709 0.012481216
Cucumber (👉 📊) Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) MR Egger 16 0.301103362 0.119451716 0.024466956
Cucumber (👉 📊) Non-cancer illness code, self-reported: cervical spondylosis (ukb-b-2349) Inverse variance weighted 4 0.008727436 0.00383162 0.022742063
Cucumber (👉 📊) Operative procedures - main OPCS: W91.9 Unspecified other manipulation of joint (ukb-b-4663) Wald ratio 1 -0.008812964 0.004404127 0.045384916
Cucumber (👉 📊) Non-cancer illness code, self-reported: other joint disorder (ukb-b-5316) Weighted median 4 0.012979955 0.004498709 0.003910875
Cucumber (👉 📊) Non-cancer illness code, self-reported: other joint disorder (ukb-b-5316) Inverse variance weighted 4 0.012235698 0.003586209 0.000645176
Cucumber (👉 📊) Adhesive capsulitis of shoulder (ukb-d-M13_ADHCAPSULITIS) Inverse variance weighted 13 -0.003819564 0.001641623 0.019981245
Cucumber (👉 📊) Ankle spacing width (ukb-e-3143_EAS) MR Egger 7 2.700023377 1.035295707 0.047786661
Cucumber (👉 📊) Osteoarthrosis (ukb-e-740_CSA) Inverse variance weighted 10 2.520967762 0.853838462 0.003152005
Cucumber (👉 📊) M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_CSA) Inverse variance weighted 10 2.134536951 0.923309828 0.020786958

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Cucumber Rheumatoid Arthritis (bbj-a-74) rs2232354 -2.75454033201855 0.890006212705706 0.0019683444238257
Cucumber Rheumatoid arthritis (ebi-a-GCST002318) rs2232354 -2.62128140667216 1.01842139482467 0.0100568871146005
Cucumber Rheumatoid arthritis (ebi-a-GCST002318) rs4343301 1.28898172414846 0.657642846863975 0.0499954802862695
Cucumber Total body bone mineral density (age 0-15) (ebi-a-GCST005345) rs35040843 1.25366611075968 0.55974083232695 0.0251087147774743
Cucumber Total body bone mineral density (age 0-15) (ebi-a-GCST005345) rs4254639 -1.10714425724679 0.475842220452834 0.0199809957713187
Cucumber Total body bone mineral density (age 0-15) (ebi-a-GCST005345) All - MR Egger -0.697449572833686 0.304448698587359 0.0368694963571155
Cucumber Neck injury (ebi-a-GCST90038700) rs148590142 0.0199649581312807 0.0077040134665405 0.0095558280858994
Cucumber Neck injury (ebi-a-GCST90038700) rs77781525 -0.0243731732239182 0.0077948782941376 0.0017670870737566
Cucumber Neck injury (ebi-a-GCST90038700) rs78250650 0.0164141000045095 0.0081643121564061 0.0443815285846855
Cucumber Fractures (ebi-a-GCST90038703) All - MR Egger -0.0129835998317528 0.0060010027662545 0.0497079876940657
Cucumber Malignant neoplasm of bone and articular cartilage (finn-b-C3_BONE_CARTILAGE) All - MR Egger 4.92634266517383 2.20587735952672 0.0411884929568624
Cucumber Malignant neoplasm of bone and articular cartilage (all cancers excluded) (finn-b-C3_BONE_CARTILAGE_EXALLC) All - MR Egger 4.99964343154619 2.21062429979145 0.0390051367583463
Cucumber Adhesive capsulitis of shoulder (finn-b-M13_ADHCAPSULITIS) All - Inverse variance weighted 0.586439477294347 0.253861371218823 0.0208838561195155
Cucumber Bicipital tendinitis (finn-b-M13_BICIPITALTEND) rs140812249 3.4192471080887 1.51235929780846 0.0237673352613926
Cucumber Bicipital tendinitis (finn-b-M13_BICIPITALTEND) rs183032803 4.9980482473261 1.98610352096182 0.0118523727080778
Cucumber Bicipital tendinitis (finn-b-M13_BICIPITALTEND) rs7328844 4.32163150930178 2.01136452089982 0.031665581311785
Cucumber Bicipital tendinitis (finn-b-M13_BICIPITALTEND) All - Inverse variance weighted 1.32788917909425 0.530509661376725 0.0123130134190301
Cucumber Chondromalacia (finn-b-M13_CHONDROMALACIA) rs117632321 5.7080346792496 2.5568599278332 0.0255859404560149
Cucumber Chondromalacia (finn-b-M13_CHONDROMALACIA) All - MR Egger 3.3230558017133 1.16756028271523 0.0122615223056383
Cucumber Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) rs183032803 -8.13490514482005 3.67241783121243 0.0267507273777046
Cucumber Chronic crepitant synovitis/bursitis of hand and wrist/periarhritis of wrist (finn-b-M13_CHRONSYNOVITISHANDWRIST) All - Inverse variance weighted -1.94909807612387 0.94228476582383 0.0385948212760621
Cucumber Impingement syndrome of shoulder (finn-b-M13_IMPINGEMENT) rs140812249 1.21819330166723 0.5762192747943 0.0345055219817355
Cucumber Impingement syndrome of shoulder (finn-b-M13_IMPINGEMENT) rs4254639 1.62624486137716 0.712411506189328 0.0224461332327299
Cucumber Impingement syndrome of shoulder (finn-b-M13_IMPINGEMENT) rs77781525 1.86301456668277 0.754077324609694 0.0134891037280277
Cucumber Impingement syndrome of shoulder (finn-b-M13_IMPINGEMENT) All - Inverse variance weighted 0.476571436481018 0.232713195864731 0.0405706063474881
Cucumber Loose body in joint (finn-b-M13_LOOSEJOINT) All - MR Egger -2.94362942121806 1.27466957577957 0.0355767488042812
Cucumber Pathological/recurrent dislocation and subluxation of joint, not elsewhere classified (finn-b-M13_PATHODISLOCATIO) rs117632321 -4.40103188727611 1.43680506800333 0.0021908013757422
Cucumber Pathological/recurrent dislocation and subluxation of joint, not elsewhere classified (finn-b-M13_PATHODISLOCATIO) All - MR Egger -1.77473108656586 0.707112871891229 0.0240348468383597
Cucumber Pyogenic arthritis (finn-b-M13_PYOGARTH) rs117632321 3.3446536156873 1.6131402354401 0.0381368760397568
Cucumber Pyogenic arthritis (finn-b-M13_PYOGARTH) All - Inverse variance weighted 0.821385370198752 0.409394497604633 0.0448197731368995
Cucumber Shoulder lesions (finn-b-M13_SHOULDER) rs4254639 1.00440559601266 0.410954644936539 0.0145222483050517
Cucumber Shoulder lesions (finn-b-M13_SHOULDER) rs76515994 0.96548326274599 0.385624816425533 0.0122907231005575
Cucumber Shoulder lesions (finn-b-M13_SHOULDER) All - Inverse variance weighted 0.303620205293102 0.115424955583496 0.0085270540897935
Cucumber Injuries to the neck (finn-b-ST19_INJURI_NECK) rs140812249 -1.52706759761553 0.689559702719305 0.0267906525240073
Cucumber Injuries to the neck (finn-b-ST19_INJURI_NECK) All - Inverse variance weighted -0.500329915600613 0.235726084670718 0.0337953097596429
Cucumber Injury of muscle and tendon at lower leg level (finn-b-ST19_INJURY_MUSCLE_TENDON_LOWER_LEG_LEVEL) All - Inverse variance weighted -0.762386277988372 0.290182417202628 0.0086074124576276
Cucumber Injury of nerves at shoulder and upper arm level (finn-b-ST19_INJURY_NERVES_SHOUL_UPPER_ARM_LEVEL) rs140812249 8.35431429041105 3.36820065581713 0.0131253716637058
Cucumber Injury of nerves at shoulder and upper arm level (finn-b-ST19_INJURY_NERVES_SHOUL_UPPER_ARM_LEVEL) rs183032803 10.7705519556562 4.61082051682411 0.0194949128850458
Cucumber Injury of nerves at shoulder and upper arm level (finn-b-ST19_INJURY_NERVES_SHOUL_UPPER_ARM_LEVEL) All - MR Egger 6.36049839928334 2.11399215964218 0.0088140548207692
Cucumber Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) rs4254639 -8.653028559996 2.92805184517284 0.0031244921174837
Cucumber Other and unspecified injuries of shoulder and upper arm (finn-b-ST19_OTHER_UNSPE_INJURI_SHOUL_UPPER_ARM) rs7328844 -6.73153265353779 3.15093017825173 0.0326497856176951
Cucumber Osteomyelitis (ieu-b-4975) rs183032803 -1.86663283628699 0.89554219689281 0.0371273823906243
Cucumber Osteomyelitis (ieu-b-4975) rs2232354 2.10117680204586 0.956698886047419 0.0280720449770326
Cucumber Osteomyelitis (ieu-b-4975) rs7328844 -1.8901907060014 0.904743519887912 0.0366896693152229
Cucumber Osteomyelitis (ieu-b-4975) All - MR Egger -1.05506805911137 0.430495241656887 0.0269976341428256
Cucumber Bone sialoprotein 2 (prot-a-1396) rs2232354 2.5717711990522 1.13056795688671 0.0229203079710577
Cucumber Bone sialoprotein 2 (prot-a-1396) All - MR Egger -1.15642404986071 0.477004287268517 0.0284371772650551
Cucumber Alkaline phosphatase, bone (prot-c-2795_23_3) rs4254639 3.45120792277297 1.59115149761876 0.030082668426997
Cucumber Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) rs76515994 -0.0580601271519665 0.0294825805595824 0.0489183348979959
Cucumber Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) rs77781525 -0.0677945614549257 0.0289155385870555 0.0190489334304332
Cucumber Non-cancer illness code self-reported: osteoarthritis (ukb-a-106) All - Inverse variance weighted -0.0184012985896713 0.0073657090579363 0.0124812159267332
Cucumber Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs28567375 0.368488060846251 0.187084538889834 0.0488803368560542
Cucumber Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs35040843 -0.360711177564361 0.177211647209922 0.0418023641632203
Cucumber Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs4254639 0.533574588943968 0.175381653849117 0.0023472893118037
Cucumber Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) rs79041188 0.512728086367959 0.180220394920848 0.004441060082675
Cucumber Heel bone mineral density (BMD) T-score automated (right) (ukb-a-362) All - MR Egger 0.301103362305176 0.119451715612207 0.0244669563746702
Cucumber Non-cancer illness code, self-reported: cervical spondylosis (ukb-b-2349) rs4343301 0.0178423506120295 0.0077995281681849 0.0221597051186049
Cucumber Non-cancer illness code, self-reported: cervical spondylosis (ukb-b-2349) All - Inverse variance weighted 0.0087274358827556 0.00383162049316 0.0227420633605492
Cucumber Operative procedures - main OPCS: W91.9 Unspecified other manipulation of joint (ukb-b-4663) rs4343301 -0.0088129636009227 0.0044041270021236 0.0453849157651968
Cucumber Non-cancer illness code, self-reported: other joint disorder (ukb-b-5316) rs7328844 0.0153744531797307 0.006985350665525 0.0277391011856142
Cucumber Non-cancer illness code, self-reported: other joint disorder (ukb-b-5316) All - Inverse variance weighted 0.0122356982397759 0.0035862092233679 0.0006451764870787
Cucumber Adhesive capsulitis of shoulder (ukb-d-M13_ADHCAPSULITIS) All - Inverse variance weighted -0.0038195643383724 0.0016416231399414 0.0199812450446156
Cucumber Ankle spacing width (ukb-e-3143_EAS) All - MR Egger 2.70002337713106 1.0352957068983 0.0477866608804642
Cucumber Osteoarthrosis (ukb-e-740_CSA) All - Inverse variance weighted 2.52096776211713 0.853838462064754 0.0031520046825147
Cucumber M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_CSA) rs9289020 6.63523452224528 2.36632915757493 0.0050469758540203
Cucumber M17 Gonarthrosis [arthrosis of knee] (ukb-e-M17_CSA) All - Inverse variance weighted 2.13453695140195 0.923309828240498 0.0207869584796275