ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Onion (ukb-b-8124)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Onion (👉 📊) Osteoarthritis (hip) (ebi-a-GCST007091) Weighted median 14 -0.452177507 0.161447614 0.005098096
Onion (👉 📊) Osteoarthritis (hip) (ebi-a-GCST007091) Inverse variance weighted 14 -0.278115631 0.121906603 0.022525803
Onion (👉 📊) Osteoarthritis of the hip or knee (ebi-a-GCST007092) Inverse variance weighted 14 -0.191880568 0.08289 0.020619392
Onion (👉 📊) Osteopontin levels (ebi-a-GCST90010244) MR Egger 13 -2.101925244 0.84005259 0.029394595
Onion (👉 📊) Neck circumference (ebi-a-GCST90017134) Weighted median 12 2.237586469 1.032999882 0.030303145
Onion (👉 📊) Neck circumference (BMI adjusted) (ebi-a-GCST90017137) Weighted median 12 2.237586469 1.004777698 0.02595083
Onion (👉 📊) Compression fracture (ebi-a-GCST90018608) Weighted median 8 -1.053806146 0.433607705 0.015085433
Onion (👉 📊) Compression fracture (ebi-a-GCST90018608) Inverse variance weighted 8 -0.819964649 0.314874762 0.009211649
Onion (👉 📊) Compression fracture (ebi-a-GCST90018828) MR Egger 14 1.618798026 0.657080148 0.029839886
Onion (👉 📊) Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) Weighted median 12 -0.487626633 0.216178186 0.02409131
Onion (👉 📊) Benign neoplasm: Skin of upper limb, including shoulder (finn-b-CD2_BENIGN_SKIN_UPPERLIMB) Weighted median 13 -3.589014992 1.542849271 0.020006535
Onion (👉 📊) Disorders of continuity of bone (finn-b-M13_BONECONTINUITY) MR Egger 13 3.012178854 1.336120942 0.04553554
Onion (👉 📊) Cervicalgia (finn-b-M13_CERVICALGIA) Inverse variance weighted 13 0.618245129 0.292553723 0.034577629
Onion (👉 📊) Fracture of shoulder and upper arm (finn-b-ST19_FRACT_SHOUL_UPPER_ARM) Inverse variance weighted 13 -0.483428692 0.228398939 0.034293997
Onion (👉 📊) Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) Inverse variance weighted 13 -3.603069511 1.812927397 0.04687457
Onion (👉 📊) Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) Inverse variance weighted 13 3.02628607 1.473580436 0.040005136
Onion (👉 📊) Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) Inverse variance weighted 13 0.424172637 0.202346926 0.036058752
Onion (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) Weighted median 14 0.038650563 0.014838178 0.009192654
Onion (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) Inverse variance weighted 14 0.024850109 0.010608525 0.019156777
Onion (👉 📊) Non-cancer illness code, self-reported: osteoporosis (ukb-b-12141) Weighted median 8 -0.011248188 0.004467199 0.011803973
Onion (👉 📊) Non-cancer illness code, self-reported: osteoporosis (ukb-b-12141) Inverse variance weighted 8 -0.00899687 0.003657332 0.013895463
Onion (👉 📊) Diagnoses - main ICD10: M51.2 Other specified intervertebral disk displacement (ukb-b-12872) Weighted median 5 -0.008334921 0.002711098 0.002109468
Onion (👉 📊) Diagnoses - main ICD10: M51.2 Other specified intervertebral disk displacement (ukb-b-12872) Inverse variance weighted 5 -0.006575497 0.002110501 0.001835648
Onion (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) Inverse variance weighted 14 0.023344768 0.009919958 0.018606949
Onion (👉 📊) Operative procedures - secondary OPCS: Y76.7 Arthroscopic approach to joint (ukb-b-4455) Weighted median 7 -0.008749019 0.004113086 0.033410285
Onion (👉 📊) Diagnoses - main ICD10: M75.0 Adhesive capsulitis of shoulder (ukb-b-4921) Weighted median 3 0.006692335 0.003095244 0.030607804
Onion (👉 📊) Operative procedures - main OPCS: W15.1 Osteotomy of neck of first metatarsal bone (ukb-b-6551) Weighted median 4 -0.004970676 0.002505564 0.047272045
Onion (👉 📊) Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) Inverse variance weighted 6 -0.004520083 0.002275843 0.047020682
Onion (👉 📊) Non-cancer illness code, self-reported: joint disorder (ukb-b-8201) Weighted median 6 -0.006134346 0.003074233 0.045998501
Onion (👉 📊) Non-cancer illness code, self-reported: joint disorder (ukb-b-8201) Inverse variance weighted 6 -0.005021086 0.002445271 0.040035094
Onion (👉 📊) Other specific joint derangements/joint disorders (ukb-d-M13_JOINTOTH) Weighted median 14 -0.009202091 0.004689767 0.049743404
Onion (👉 📊) Other specific joint derangements/joint disorders (ukb-d-M13_JOINTOTH) Inverse variance weighted 14 -0.007201715 0.003586685 0.044653657
Onion (👉 📊) Diagnoses - main ICD10: M25 Other joint disorders, not elsewhere classified (ukb-d-M25) Inverse variance weighted 14 -0.006985262 0.003511315 0.04666174
Onion (👉 📊) Diagnoses - main ICD10: M51 Other intervertebral disk disorders (ukb-d-M51) MR Egger 14 0.014107553 0.005856305 0.032975826
Onion (👉 📊) Neck/shoulder pain for 3+ months (ukb-e-3404_AFR) Inverse variance weighted 9 -2.305522619 1.060806248 0.029752612

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Onion Osteoarthritis (hip) (ebi-a-GCST007091) All - Inverse variance weighted -0.278115630510072 0.121906602733449 0.0225258030754718
Onion Osteoarthritis of the hip or knee (ebi-a-GCST007092) rs11961853 -0.947934268706982 0.294389524443162 0.0012819059673201
Onion Osteoarthritis of the hip or knee (ebi-a-GCST007092) All - Inverse variance weighted -0.191880568183062 0.082890000204172 0.0206193915387749
Onion Osteopontin levels (ebi-a-GCST90010244) All - MR Egger -2.10192524445325 0.84005258965047 0.0293945954362136
Onion Compression fracture (ebi-a-GCST90018608) All - Inverse variance weighted -0.819964649349331 0.314874762003057 0.0092116488839189
Onion Compression fracture (ebi-a-GCST90018828) rs113181638 3.08188236470489 1.37012228728286 0.0244903392214374
Onion Compression fracture (ebi-a-GCST90018828) rs4378921 -1.71034249185047 0.733810310034856 0.0197655314031897
Onion Compression fracture (ebi-a-GCST90018828) All - MR Egger 1.61879802572296 0.65708014832971 0.0298398863196727
Onion Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) rs11961853 -1.05980228799538 0.47102323910906 0.0244489453100894
Onion Medication use (drugs affecting bone structure and mineralization) (ebi-a-GCST90018993) rs1467978 -1.05154332570935 0.467352589204155 0.0244489453100894
Onion Benign neoplasm: Skin of upper limb, including shoulder (finn-b-CD2_BENIGN_SKIN_UPPERLIMB) rs9640159 -9.24467274735881 3.5854015530093 0.009925314480646
Onion Disorders of continuity of bone (finn-b-M13_BONECONTINUITY) rs144108770 10.4847829150328 4.06790477865264 0.0099534988519446
Onion Disorders of continuity of bone (finn-b-M13_BONECONTINUITY) All - MR Egger 3.01217885388694 1.336120942464 0.0455355402898776
Onion Cervicalgia (finn-b-M13_CERVICALGIA) All - Inverse variance weighted 0.618245129495013 0.292553722856698 0.0345776287801395
Onion Fracture of shoulder and upper arm (finn-b-ST19_FRACT_SHOUL_UPPER_ARM) rs113181638 -1.53320374111236 0.643993186290206 0.0172761977418935
Onion Fracture of shoulder and upper arm (finn-b-ST19_FRACT_SHOUL_UPPER_ARM) rs4378921 -1.71598718654305 0.677363363109098 0.0112983455111213
Onion Fracture of shoulder and upper arm (finn-b-ST19_FRACT_SHOUL_UPPER_ARM) All - Inverse variance weighted -0.48342869211438 0.228398938573321 0.0342939965509246
Onion Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) rs4378921 -16.6264482169821 5.53744549341688 0.0026772937930413
Onion Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) All - Inverse variance weighted -3.60306951067372 1.81292739709782 0.0468745696427932
Onion Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) rs6890703 14.5300454738543 5.11145620791231 0.0044741147702703
Onion Open wound of neck (finn-b-ST19_OPEN_WOUND_NECK) All - Inverse variance weighted 3.02628607000117 1.47358043578406 0.0400051355563117
Onion Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) rs4378921 1.44504184129941 0.623738763529628 0.0205177857632471
Onion Open wound of wrist and hand (finn-b-ST19_OPEN_WOUND_WRIST_HAND) All - Inverse variance weighted 0.42417263674531 0.202346925760719 0.0360587517508241
Onion Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) All - Inverse variance weighted 0.0248501091278758 0.0106085247890891 0.0191567769147323
Onion Non-cancer illness code, self-reported: osteoporosis (ukb-b-12141) All - Inverse variance weighted -0.0089968702055931 0.0036573319496953 0.0138954629070297
Onion Diagnoses - main ICD10: M51.2 Other specified intervertebral disk displacement (ukb-b-12872) rs1467978 -0.0083656467522535 0.0042517047747856 0.0491142845670747
Onion Diagnoses - main ICD10: M51.2 Other specified intervertebral disk displacement (ukb-b-12872) rs7511986 -0.0096580555297613 0.0046628284891819 0.0383319934998437
Onion Diagnoses - main ICD10: M51.2 Other specified intervertebral disk displacement (ukb-b-12872) All - Inverse variance weighted -0.0065754972494498 0.0021105006418585 0.0018356476867612
Onion Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) rs11961853 0.0737021837814923 0.0340900125409937 0.0306191333881182
Onion Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) All - Inverse variance weighted 0.023344768481947 0.009919957751291 0.0186069493663043
Onion Operative procedures - secondary OPCS: Y76.7 Arthroscopic approach to joint (ukb-b-4455) rs1467978 -0.0150026200069395 0.0068268883522988 0.0279791886995616
Onion Diagnoses - main ICD10: M75.0 Adhesive capsulitis of shoulder (ukb-b-4921) rs783494 0.0085178790917324 0.0040982420106093 0.0376704467328848
Onion Diagnoses - main ICD10: M75.0 Adhesive capsulitis of shoulder (ukb-b-4921) rs9640159 0.0091174887033927 0.0040627106273854 0.0248202719302025
Onion Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) rs1467978 -0.0133141671564427 0.0052269492497574 0.0108586293764952
Onion Operative procedures - main OPCS: A52.1 Therapeutic lumbar epidural injection (ukb-b-6798) All - Inverse variance weighted -0.0045200827531732 0.0022758427002832 0.0470206815176454
Onion Non-cancer illness code, self-reported: joint disorder (ukb-b-8201) rs6890703 -0.0111957255969749 0.0055417865026915 0.0433587453878661
Onion Non-cancer illness code, self-reported: joint disorder (ukb-b-8201) All - Inverse variance weighted -0.0050210859635749 0.0024452705859241 0.0400350935441776
Onion Other specific joint derangements/joint disorders (ukb-d-M13_JOINTOTH) All - Inverse variance weighted -0.0072017146146162 0.0035866854732606 0.0446536568532916
Onion Diagnoses - main ICD10: M25 Other joint disorders, not elsewhere classified (ukb-d-M25) All - Inverse variance weighted -0.006985261865097 0.0035113152438592 0.0466617398784038
Onion Diagnoses - main ICD10: M51 Other intervertebral disk disorders (ukb-d-M51) rs188458079 0.0201815640133802 0.0094809366106941 0.0332835053252534
Onion Diagnoses - main ICD10: M51 Other intervertebral disk disorders (ukb-d-M51) rs9640159 -0.0240377444274724 0.0110533662493669 0.0296526805793013
Onion Diagnoses - main ICD10: M51 Other intervertebral disk disorders (ukb-d-M51) All - MR Egger 0.0141075525416649 0.0058563054217492 0.0329758257486812
Onion Neck/shoulder pain for 3+ months (ukb-e-3404_AFR) rs7511986 -5.49726065558548 2.68957191939827 0.040961788305996
Onion Neck/shoulder pain for 3+ months (ukb-e-3404_AFR) All - Inverse variance weighted -2.30552261891119 1.06080624803381 0.0297526124707508