ONMR: An Orthopedic and Nutritional Mendelian Randomization Database

Berry (ukb-b-8887)

Mendelian Randomization Results

Intake (exposure) Outcome Method Number of SNPs b se P-value
Berry (👉 📊) Osteoarthritis (self-reported) (ebi-a-GCST005811) Weighted median 13 0.627547396 0.247431857 0.011204885
Berry (👉 📊) Osteoarthritis (self-reported) (ebi-a-GCST005811) Inverse variance weighted 13 0.699465962 0.203745983 0.000596877
Berry (👉 📊) Osteoarthritis of the hip or knee (hospital diagnosed) (ebi-a-GCST005812) Inverse variance weighted 13 0.849939751 0.252345643 0.000756725
Berry (👉 📊) Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) MR Egger 13 1.501333626 0.678203869 0.048902018
Berry (👉 📊) Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) Weighted median 13 1.003700868 0.417327862 0.016169565
Berry (👉 📊) Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) Inverse variance weighted 13 1.13462506 0.304644594 0.000195763
Berry (👉 📊) Osteoarthritis (hospital diagnosed) (ebi-a-GCST005814) Inverse variance weighted 13 0.64161764 0.204309155 0.001687027
Berry (👉 📊) Neck circumference (ebi-a-GCST90017134) Weighted median 11 -3.17907752 1.424561713 0.025640223
Berry (👉 📊) Neck circumference (BMI adjusted) (ebi-a-GCST90017137) Weighted median 11 -3.17907752 1.424983446 0.025683944
Berry (👉 📊) Pain in joint (finn-b-JOINTPAIN) Weighted median 13 0.500108375 0.234533557 0.032977823
Berry (👉 📊) Pain in joint (finn-b-JOINTPAIN) Inverse variance weighted 13 0.375677178 0.186759358 0.044266609
Berry (👉 📊) Other specified/unspecified disorders of bone/cartilage (finn-b-M13_BONEDISNAS) Weighted median 13 2.3170988 1.151245034 0.044147304
Berry (👉 📊) Other bursitis of knee (finn-b-M13_BURSITISKNEEOTH) Inverse variance weighted 13 2.545217096 1.262219519 0.043751738
Berry (👉 📊) Other specific joint derangements/joint disorders (finn-b-M13_JOINTOTH) Inverse variance weighted 13 0.336061571 0.164870215 0.041515932
Berry (👉 📊) Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) Inverse variance weighted 13 0.307957384 0.13869225 0.026389128
Berry (👉 📊) Drug-induced osteoporosis with pathological fracture (finn-b-OSTPOPATFRACTURE) Weighted median 13 -3.772057963 1.850052398 0.041460757
Berry (👉 📊) Drug-induced osteoporosis with pathological fracture (finn-b-OSTPOPATFRACTURE) Inverse variance weighted 13 -2.728512543 1.328955316 0.040060371
Berry (👉 📊) Injury of muscle and tendon at ankle and foot level (finn-b-ST19_INJURY_MUSCLE_TENDON_ANKLE_FOOT_LEVEL) Inverse variance weighted 13 2.355760777 1.058503772 0.02604385
Berry (👉 📊) Injury of muscle and tendon at forearm level (finn-b-ST19_INJURY_MUSCLE_TENDON_FOREA_LEVEL) Weighted median 13 -2.820790694 1.377470357 0.04057911
Berry (👉 📊) Injury of muscle and tendon at shoulder and upper arm level (finn-b-ST19_INJURY_MUSCLE_TENDON_SHOUL_UPPER_ARM_LEVEL) Inverse variance weighted 13 -0.477668638 0.233463977 0.040755806
Berry (👉 📊) Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) MR Egger 13 12.02554937 3.899133648 0.010393852
Berry (👉 📊) Lumbar spine bone mineral density (ieu-a-982) MR Egger 11 -0.599661031 0.263310771 0.048770286
Berry (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) Weighted median 13 -0.06480093 0.019123536 0.000702649
Berry (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) Inverse variance weighted 13 -0.049253952 0.015499147 0.001483719
Berry (👉 📊) Operative procedures - secondary OPCS: Z86.4 Metatarsophalangeal joint of great toe (ukb-b-17501) Inverse variance weighted 3 0.007410506 0.003223277 0.021501552
Berry (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) Weighted median 13 -0.043326262 0.017138614 0.01147173
Berry (👉 📊) Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) Inverse variance weighted 13 -0.029325702 0.014174446 0.038554207
Berry (👉 📊) Ankle spacing width (ukb-b-4080) Inverse variance weighted 13 -0.089031826 0.045285902 0.049299266
Berry (👉 📊) Operation code: shoulder surgery (ukb-b-5935) Inverse variance weighted 7 -0.013152047 0.006553651 0.044768035
Berry (👉 📊) Impingement syndrome of shoulder (ukb-d-M13_IMPINGEMENT) MR Egger 13 -0.021200819 0.006682242 0.008875658
Berry (👉 📊) Shoulder lesions (ukb-d-M13_SHOULDER) MR Egger 13 -0.030915214 0.010138734 0.011062934
Berry (👉 📊) Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) MR Egger 13 -0.031099162 0.010124841 0.010630072
Berry (👉 📊) Diagnoses - main ICD10: S61 Open wound of wrist and hand (ukb-d-S61) MR Egger 13 -0.01342168 0.005277238 0.027318274
Berry (👉 📊) Diagnoses - main ICD10: S62 Fracture at wrist and hand level (ukb-d-S62) MR Egger 13 0.011727083 0.004792171 0.032410124

Mendelian Randomization Results (Single SNP)

Intake (exposure) Outcome SNP b se P-value
Berry Osteoarthritis (self-reported) (ebi-a-GCST005811) rs696217 2.75154224503651 0.687233511596019 6.23343289323382e-05
Berry Osteoarthritis (self-reported) (ebi-a-GCST005811) rs7658609 1.24224475088464 0.603217082196329 0.0394591900834379
Berry Osteoarthritis (self-reported) (ebi-a-GCST005811) All - Inverse variance weighted 0.699465962436749 0.203745982835068 0.0005968772289588
Berry Osteoarthritis of the hip or knee (hospital diagnosed) (ebi-a-GCST005812) rs696217 2.92807865382603 0.954579240134059 0.0021592796049581
Berry Osteoarthritis of the hip or knee (hospital diagnosed) (ebi-a-GCST005812) All - Inverse variance weighted 0.849939751183068 0.252345643198567 0.0007567248351323
Berry Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) rs72791977 3.10575635876841 1.10219086002431 0.0048353515535781
Berry Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) All - Inverse variance weighted 1.134625060466 0.304644594054968 0.0001957631439136
Berry Osteoarthritis of the knee (hospital diagnosed) (ebi-a-GCST005813) All - MR Egger 1.50133362635012 0.678203869062663 0.0489020178560053
Berry Osteoarthritis (hospital diagnosed) (ebi-a-GCST005814) rs696217 2.50845383729885 0.77122448486735 0.001143704849483
Berry Osteoarthritis (hospital diagnosed) (ebi-a-GCST005814) All - Inverse variance weighted 0.641617639557805 0.204309155106703 0.0016870272542244
Berry Neck circumference (ebi-a-GCST90017134) rs12964409 8.62221672948979 3.16793342808297 0.0064943826692894
Berry Neck circumference (ebi-a-GCST90017134) rs1498885 -9.74088062341636 2.98800019123201 0.0011141221380492
Berry Neck circumference (BMI adjusted) (ebi-a-GCST90017137) rs12964409 8.62221672948979 3.16793342808297 0.0064943826692894
Berry Neck circumference (BMI adjusted) (ebi-a-GCST90017137) rs1498885 -9.74088062341636 2.98800019123201 0.0011141221380492
Berry Pain in joint (finn-b-JOINTPAIN) rs149701248 0.898990983254616 0.436077715757836 0.0392516980738843
Berry Pain in joint (finn-b-JOINTPAIN) rs72665864 -1.5983181334187 0.810510757997834 0.0486108855991463
Berry Pain in joint (finn-b-JOINTPAIN) All - Inverse variance weighted 0.375677177976358 0.186759358228688 0.0442666088051791
Berry Other bursitis of knee (finn-b-M13_BURSITISKNEEOTH) rs113544454 9.47637139637618 4.20119464305302 0.0240933544074107
Berry Other bursitis of knee (finn-b-M13_BURSITISKNEEOTH) rs696217 8.98916202226629 4.40066439299006 0.0410838360064331
Berry Other bursitis of knee (finn-b-M13_BURSITISKNEEOTH) All - Inverse variance weighted 2.54521709570987 1.26221951850082 0.0437517375246845
Berry Other specific joint derangements/joint disorders (finn-b-M13_JOINTOTH) rs149701248 0.897872835265493 0.398060684127666 0.0240945663518027
Berry Other specific joint derangements/joint disorders (finn-b-M13_JOINTOTH) All - Inverse variance weighted 0.336061570836932 0.164870214722458 0.0415159316882895
Berry Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) rs1498885 1.34659208618189 0.565728036206594 0.0172994081285744
Berry Internar derangement of knee (finn-b-M13_KNEEDERANGEMENTS) All - Inverse variance weighted 0.307957383964012 0.138692250331613 0.0263891276919472
Berry Drug-induced osteoporosis with pathological fracture (finn-b-OSTPOPATFRACTURE) All - Inverse variance weighted -2.72851254315441 1.32895531627285 0.0400603713081463
Berry Injury of muscle and tendon at ankle and foot level (finn-b-ST19_INJURY_MUSCLE_TENDON_ANKLE_FOOT_LEVEL) rs7658609 9.76946808424496 3.35635683457898 0.0036057874252848
Berry Injury of muscle and tendon at ankle and foot level (finn-b-ST19_INJURY_MUSCLE_TENDON_ANKLE_FOOT_LEVEL) All - Inverse variance weighted 2.35576077721897 1.05850377206178 0.0260438502754749
Berry Injury of muscle and tendon at shoulder and upper arm level (finn-b-ST19_INJURY_MUSCLE_TENDON_SHOUL_UPPER_ARM_LEVEL) rs7658609 -1.7773711102294 0.813784950241706 0.0289563992820184
Berry Injury of muscle and tendon at shoulder and upper arm level (finn-b-ST19_INJURY_MUSCLE_TENDON_SHOUL_UPPER_ARM_LEVEL) All - Inverse variance weighted -0.477668637529032 0.233463977371271 0.0407558060455831
Berry Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) rs113544454 14.494271098214 6.10584258234361 0.0176043508179108
Berry Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) rs149701248 12.0860616144268 4.96793151567196 0.0149819259705455
Berry Injury of nerves at ankle and foot level (finn-b-ST19_INJURY_NERVES_ANKLE_FOOT_LEVEL) All - MR Egger 12.0255493656922 3.89913364765282 0.0103938518742476
Berry Lumbar spine bone mineral density (ieu-a-982) All - MR Egger -0.599661030706254 0.263310771461635 0.048770286476476
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) rs449233 -0.127434527444196 0.0476596105570256 0.0074986556712961
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) rs78192709 -0.123826426293851 0.0459810488087431 0.0070814754803686
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-a-472) All - Inverse variance weighted -0.0492539517987018 0.0154991467344054 0.0014837187455482
Berry Operative procedures - secondary OPCS: Z86.4 Metatarsophalangeal joint of great toe (ukb-b-17501) All - Inverse variance weighted 0.007410505659781 0.0032232767917377 0.0215015515183581
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) rs449233 -0.104250118732614 0.0408706492977814 0.010749660670774
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) rs78192709 -0.0802933068233634 0.0399491176143605 0.0444428990972351
Berry Pain type(s) experienced in last month: Neck or shoulder pain (ukb-b-18596) All - Inverse variance weighted -0.0293257015416264 0.0141744456392558 0.0385542071480426
Berry Ankle spacing width (ukb-b-4080) rs1498885 -0.215053146563401 0.103562493028 0.0378427088739512
Berry Ankle spacing width (ukb-b-4080) rs6064351 -0.47598941817481 0.0981166453511799 1.22679211638689e-06
Berry Ankle spacing width (ukb-b-4080) All - Inverse variance weighted -0.0890318262942214 0.0452859019018704 0.04929926576364
Berry Operation code: shoulder surgery (ukb-b-5935) rs12964409 -0.0329343137860718 0.0122384807102103 0.0071228386299881
Berry Operation code: shoulder surgery (ukb-b-5935) rs1498885 -0.0321595273382098 0.0115682220203662 0.0054360777842003
Berry Operation code: shoulder surgery (ukb-b-5935) rs7658609 -0.0244220507380746 0.0120671352340543 0.0429857661346564
Berry Operation code: shoulder surgery (ukb-b-5935) All - Inverse variance weighted -0.0131520472788547 0.0065536511505011 0.0447680348615361
Berry Impingement syndrome of shoulder (ukb-d-M13_IMPINGEMENT) rs449233 -0.0326146617816677 0.0106354230273424 0.0021650336688353
Berry Impingement syndrome of shoulder (ukb-d-M13_IMPINGEMENT) All - MR Egger -0.0212008190858286 0.0066822421104499 0.0088756584917371
Berry Shoulder lesions (ukb-d-M13_SHOULDER) rs449233 -0.0419840219824954 0.0153891207001832 0.0063688225531478
Berry Shoulder lesions (ukb-d-M13_SHOULDER) rs696217 -0.0322002516965366 0.0163334952276941 0.0486753477390424
Berry Shoulder lesions (ukb-d-M13_SHOULDER) All - MR Egger -0.0309152138974425 0.0101387340774317 0.0110629336105533
Berry Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) rs449233 -0.0419343239025714 0.0153901723319085 0.006435080196137
Berry Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) rs696217 -0.0322799466553609 0.0163346222271119 0.0481358296865943
Berry Diagnoses - main ICD10: M75 Shoulder lesions (ukb-d-M75) All - MR Egger -0.0310991622418464 0.0101248412588614 0.0106300723265385
Berry Diagnoses - main ICD10: S61 Open wound of wrist and hand (ukb-d-S61) rs149701248 -0.0189196230499499 0.0078493429762415 0.0159374503636851
Berry Diagnoses - main ICD10: S61 Open wound of wrist and hand (ukb-d-S61) rs72665864 -0.0176136020505695 0.0082245500757157 0.0322266080824491
Berry Diagnoses - main ICD10: S61 Open wound of wrist and hand (ukb-d-S61) All - MR Egger -0.0134216804411046 0.0052772377930423 0.0273182737478581
Berry Diagnoses - main ICD10: S62 Fracture at wrist and hand level (ukb-d-S62) All - MR Egger 0.0117270830086996 0.0047921705510459 0.0324101237761055